Gene Psyc_0543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0543 
SymbolpyrC 
ID3513970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp636419 
End bp637630 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content47% 
IMG OID637669228 
Productdihydroorotase 
Protein accessionYP_263838 
Protein GI71065111 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0044] Dihydroorotase and related cyclic amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCATA TGATAAACAC CGACGCCACG ATACTTAACC ATCTGCCACA AAGTTTTCAA 
AATACATTGC CAAGTGCAGT AGCTGACAAA ATAGCTAATC TTGAAGCAGG GAGCGAGATG
TGGTTGCTAC CACCCTTGGT GGATTTATGC GCCCGCTTAC GTGAGCCGGG GCAACAGCAG
CATGGTACGT TAGAGTCAGA AGGACGTGCG GCACGTGGCA ATGGTTTTTT GCATGTGGTG
ATTCCACCAG ATACCAACCC TATTTTAGAG AACGGTTCAT TGTTAAAAGG CTTACGTGAG
CGGGCGCTCG ATGATGGCGG CATTTATTTG CATGTTTTGG GCGCACTGAC CGCAGGTCTA
GAGGGTGAGC GCCCGTCTAA TATCGCAGGT CTTAAAAAAG GTGGCTGTAT TGCGGTTTCC
AATGCTCGCA GACCTTTTCG TAATGATTTA GTGCTCCTGC GTACCTTGGA GTATGCAGCA
ACCTTTGGTA TGAAAGTATT CTTTTATCCT GATGAGCCAA GTCTGTCTGG AGATGGCGTT
GCGCATGAAG GTTATATTGC TTCGTATCAT GGCTTGCAAG GTATTCCTTG GATTGCAGAA
ACAGTCGCCT TATCAACGCA GCTACTGATG GTGGAGGAGA CCGCTATTGC CGCTCACTTT
AGCCAATTAT CCTGTAAGTC TTCCATCGAG CTGATGCGCT GGGCAAAAGA TAAAGGTTTG
CCAGTGACCT GTGATGTGGC AATGCATCAG CTGTACTTGA CTGATGATAA TTTAGAAGGC
TTTAATGCTC AAGCTTATGT CCTGCCACCA TTACGTAGTA ATACCGATCA GCAAGCCATT
CGCCGCGGCT TAAAGGATGG CACCATCGAT GCGATTTGTA GTCATCACGA GCCATTAAAC
AGTACCGCCA AAAAAGCCCC ATTTGCGGAG AGCACTCCAG GTATCTCAAA TTTTGATACC
TTTATGGCGC TGGCGTGTCA GCTGGTAAAG GATGAGGTAT TAACTTTAGC GCAGCTAGTC
GATAAAATCT GTCTGAACCC AGCAAAAATT GCTGGTATCA GCGAGCAATA TGAAAACATC
GGTGGCGCAG TACTGGTCGA CCCCAATCTT GAATGGCAAG TGACTAGCGA ATCCATGCTA
TCGAATGGTA AGAACACGCC ATTCTTTAAT CAAAAGCTGC AAGGGCGCGT TGTGGAGACT
TTCTTTGGCT AA
 
Protein sequence
MSHMINTDAT ILNHLPQSFQ NTLPSAVADK IANLEAGSEM WLLPPLVDLC ARLREPGQQQ 
HGTLESEGRA ARGNGFLHVV IPPDTNPILE NGSLLKGLRE RALDDGGIYL HVLGALTAGL
EGERPSNIAG LKKGGCIAVS NARRPFRNDL VLLRTLEYAA TFGMKVFFYP DEPSLSGDGV
AHEGYIASYH GLQGIPWIAE TVALSTQLLM VEETAIAAHF SQLSCKSSIE LMRWAKDKGL
PVTCDVAMHQ LYLTDDNLEG FNAQAYVLPP LRSNTDQQAI RRGLKDGTID AICSHHEPLN
STAKKAPFAE STPGISNFDT FMALACQLVK DEVLTLAQLV DKICLNPAKI AGISEQYENI
GGAVLVDPNL EWQVTSESML SNGKNTPFFN QKLQGRVVET FFG