Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0525 |
Symbol | |
ID | 3514004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 617916 |
End bp | 619688 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637669212 |
Product | YjeF-like protein |
Protein accession | YP_263822 |
Protein GI | 71065095 |
COG category | [G] Carbohydrate transport and metabolism [S] Function unknown |
COG ID | [COG0062] Uncharacterized conserved protein [COG0063] Predicted sugar kinase |
TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.069696 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGTGC AAACTAATTT ATTTTCGAAA AATACGATGC CTATCGCACT ATATAGTAGT GAACAGCTCT ATGCGATGGA ACAAGCATGG TTTGCACAAG GCAATGGTAG CTTTGGGCTA ATGCAACAAG CGGCTTGGCA AATGGCACAG CATATTGAAT CGCTTTATGA AAAAAAATGT CTTAATAAGC AATTAACTAA GCAGGGAATA ACCTCTCGTT TTAATACTAG TCAACGCCGC GCCAGTATTT GGGTCGGAAT AGGCAGTAAT GGCGGCGATG GATGGCTTAT CGCGTATTAC TTACAGCAAA GGGGCTGGCA AGTACAAGTG ATAGCCGTTG GCTTTGAGAA ACAAGATTTT GTTGTAAAAG GTAATTTAGA AATTTCTGCT GACGAAAATA AAAAATCAAT TACTGCTGCG GCAAGGGCGT TACAGTTAGC ACTATCTGTT GATTGTGAGT ATCAATGTTT TAAAAGTAGC GACAATAATA CTAATGATAC AAGCGTGAGG GCTTTGCAAG CCAATGTCTA TATCGATGCG TTATTTGGCA TTGGATTCAA TCGTGCACCG AACAATATGT ATCAACAGGC AATTTGCGCT TTTAACGCAG CAGCAGAGAA TGCCCAAGCA TTGGTCATCG CGGTTGATAT CCCAAGTGGC TTGGTTGCCT CTACTGGTCA AGTATTTGAG CGTATAGCGA TAGTAGCAGA TACGACATTA TGTTTGATAG CACGCAAATT TGGTTTGCAT ACCAAAGACG GACTCGACTA TAGCGGCGCA GTTATTGACA TACCGCTGAT ACCTTATCAG GTAAATAATG AGAAGCTAAT ACCCGTTGCG ACACTCATTA CTTCCGCTCA TTCTTTAAAG CCACGCCGTC AAAACAGTTA TAAAGGCAGC TATGGGCATG TATTGGTCAT CGGCGGCAAT CGCATTGAGG GCTCACAAGG CATGGGCGGA GCAGCCATAC TGTCTGCGTC AAGTGCGATG GCAACAGGTG CAGGTAAAAT CACTGTCGCT TGTCATGAGG TATTTCATGG CGCTTTATTA ACCTCGCTAC CAGATGCGAT GACTATCGAC TTACACGATA AAGATGGAAT AAACCGTCTT ATTGGGCAAG CCAGCGTTAT TGCTATCGGC ATGGGACTGG GCCGTGATGA GAAGGCAAAA ATAGTATTTA TAAGTTGTAT TGAAGCTGCC ATAGCCGTAG GTAAGCCGAT AATAATTGAT GCTGATGGTC TCTATCATTT GGCATCATTG CATAGTAAGA ATCACAAACT GATAGCTGAG CTAAAAACAC ACAGCGCCAC TCATCAAGTG TGTTTAACGC CGCATAGTGG GGAAGCTGCT AGGTTATTAA ATAAAAAGAT AAACGAAATA GAAAATGATA GATTAGCCGC GATAAAGCAG TGTGCAGCGA TTTATGGCGG TGATTGGGTG CTAAAAGGGG CAGGGTCATT GGTTCTGGAG CAACAATCAG GGCAAGCGCA TATTTATGTG TGCGGTGTGG GCAATGCTGG CATGGCGACT GCTGGTATGG GTGATGTACT CGCAGGCGTA ATTGCTGGAC TATTGGCACA GGAAGATTTA AAACATGAAC TGCGCAGCTT ACACCAAGCG GTCCTTATTC ATGGTCTAAC GGGAGATATT TTAGTCAACC AGACGAGCAG TAACGATGAT AATTCATTAT TGGTAGGGCA GCGAGGTCTG CAAGCTCAGG ATATGCCAGC GGCTATCCGT CATGTGATGC AGCTCATAAC AGACAGTCTT TAG
|
Protein sequence | MDVQTNLFSK NTMPIALYSS EQLYAMEQAW FAQGNGSFGL MQQAAWQMAQ HIESLYEKKC LNKQLTKQGI TSRFNTSQRR ASIWVGIGSN GGDGWLIAYY LQQRGWQVQV IAVGFEKQDF VVKGNLEISA DENKKSITAA ARALQLALSV DCEYQCFKSS DNNTNDTSVR ALQANVYIDA LFGIGFNRAP NNMYQQAICA FNAAAENAQA LVIAVDIPSG LVASTGQVFE RIAIVADTTL CLIARKFGLH TKDGLDYSGA VIDIPLIPYQ VNNEKLIPVA TLITSAHSLK PRRQNSYKGS YGHVLVIGGN RIEGSQGMGG AAILSASSAM ATGAGKITVA CHEVFHGALL TSLPDAMTID LHDKDGINRL IGQASVIAIG MGLGRDEKAK IVFISCIEAA IAVGKPIIID ADGLYHLASL HSKNHKLIAE LKTHSATHQV CLTPHSGEAA RLLNKKINEI ENDRLAAIKQ CAAIYGGDWV LKGAGSLVLE QQSGQAHIYV CGVGNAGMAT AGMGDVLAGV IAGLLAQEDL KHELRSLHQA VLIHGLTGDI LVNQTSSNDD NSLLVGQRGL QAQDMPAAIR HVMQLITDSL
|
| |