Gene Psyc_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0516 
Symbol 
ID3514315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp609944 
End bp610567 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content40% 
IMG OID637669203 
Producttranslation factor SUA5 
Protein accessionYP_263813 
Protein GI71065086 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00357682 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAGTAT TTTATATTCA TCCAGAAAAT CCGCAGCCGA GGCTGATTGA ACAAGTAGCA 
AACTTATTAC GTAAGGATCA ATTAATCATT TATCCGACTG ACACTAGTTA TGCTTTTGGC
TGTCGCTTAG GCGCAAAAGA CGCGTTAGAG AAGCTTAAAC ATATTCGTGA GCTTGATGAT
AAGCATCAAT TTACCTTACT TTGTCGTGAT TTAAGTGAGA TTGCCAATTA CGCTGCGGTA
GACAATGTAC AATTTAAACA GCTTAAAGCA CATACACCCG CACCTATTAC CTTTATTTTG
AATGCTACCA AAGATGTACC AAAGAAACTG GCGCATGCGA AGAAAAAAAC CATTGGTATT
CGCGTACCAA GCAATGCTAT AGCTCAAGCG TTATTAGAGG CGATGGATGA GCCTATTTTG
ACCAGCTCAT TAATATTGCC AAACCGAGAT AACATACTAG ATGACCCTTT TGAGATCGAA
GAATTATTGG GTAATCAGAT AGATGGGCTA ATCAATGCTG GCATCAAAAC CACAAAGCTC
ACGACCATCG TTGATATGAC CAGTAGCCAG CCTGAAGTAA TCCGGCAAGG TGCCGCTGAT
GTGGATTCAT TATTGTATAG TTGA
 
Protein sequence
MQVFYIHPEN PQPRLIEQVA NLLRKDQLII YPTDTSYAFG CRLGAKDALE KLKHIRELDD 
KHQFTLLCRD LSEIANYAAV DNVQFKQLKA HTPAPITFIL NATKDVPKKL AHAKKKTIGI
RVPSNAIAQA LLEAMDEPIL TSSLILPNRD NILDDPFEIE ELLGNQIDGL INAGIKTTKL
TTIVDMTSSQ PEVIRQGAAD VDSLLYS