| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0514 |
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| Symbol | rpoA |
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| ID | 3514313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 608345 |
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| End bp | 609352 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637669201 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_263811 |
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| Protein GI | 71065084 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00425538 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGCTAA ATGCAACTGA GTTTCTAACG CCGAACGCCA TCAACGTGGA TACGGTTAAT
GAAACGATTG CGAAAGTCAC GCTCGAACCG TTAGAACGCG GCTTTGGGCA TACCTTGGGT
AATGCCTTAC GTCGCATCTT ATTATCTTCA TTACCTGGTG CTGCAGTCAT TGAAGCTGAG
ATTGATGGTG TTGACCATGA ATACTCAACG CTTGAAGGAC TACAAGAAGA TGTACTTGAT
TTGCTTTTGA ACTTAAAAGG CTTAGCAATC ACCCTTCATG ACCAAAATGA AGTATTTTTG
ACCTTGGATA AACAAGGTCC AGGCACTATT ACTGCTGCAG ACATCACGTT ACCGCACAAT
GTAGACATCA TCAATCCAGA ATTGGTATTG GGTACATTGA GTGACCGTGG TCATCTAAAG
ATGCGTTTGC GTGTAGTAAT GGGTCGTGGA TATGAGCCAG CAAACCAACG CCGTGAAGAT
GGCGATACTA AAGCTATTGG ACGCTTAAAG CTTGATGCAA GTTTTAGTCC TGTGCTTCGT
GTTGCTTATC AGGTTGAGAA CGCACGTGTA GAACAACGTA CTGATCTTGA TCGTCTTATC
ATTGAGCTTG AAACAAATGG CACTATAGAT CCAGAAGAAG CAATTCGTAA AGCAGCCACT
ATATTACAAC AACAGATTTC TATCTTTGTT GACCTAGAAG CTGAAGAAGC GCCTGAGCCT
GTGAAAGAAA AAGAAGAGGT TGATCCGGTG CTATTACGCC CTGTGGACGA TCTTGAACTA
ACGGTTCGCT CAGCCAACTG CTTAAAAGCT GAAAACATTT ACTATATCGG TGATTTGGTA
CAGCGTTCAG AGACTGAACT TCTAAAAACC CCAAATCTTG GTAAGAAATC ATTAACAGAA
ATCAAAGACG TACTAGCGTC TAAAGATTTG GAGCTTGGTA TGCGCCTGGA TAACTGGCCA
CCAGCTGATT TACGTGTTGA TGATCGCTTT TCTTATCGTA GCCGTTAA
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| Protein sequence | MMLNATEFLT PNAINVDTVN ETIAKVTLEP LERGFGHTLG NALRRILLSS LPGAAVIEAE
IDGVDHEYST LEGLQEDVLD LLLNLKGLAI TLHDQNEVFL TLDKQGPGTI TAADITLPHN
VDIINPELVL GTLSDRGHLK MRLRVVMGRG YEPANQRRED GDTKAIGRLK LDASFSPVLR
VAYQVENARV EQRTDLDRLI IELETNGTID PEEAIRKAAT ILQQQISIFV DLEAEEAPEP
VKEKEEVDPV LLRPVDDLEL TVRSANCLKA ENIYYIGDLV QRSETELLKT PNLGKKSLTE
IKDVLASKDL ELGMRLDNWP PADLRVDDRF SYRSR
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