| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0509 |
|---|
| Symbol | secY |
|---|
| ID | 3514308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 605070 |
|---|
| End bp | 606401 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637669196 |
|---|
| Product | preprotein translocase subunit SecY |
|---|
| Protein accession | YP_263806 |
|---|
| Protein GI | 71065079 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0201] Preprotein translocase subunit SecY |
|---|
| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0470282 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00397274 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCGA CTGGTATACC GCTCAATCCA TTTGCCTTTA TACGTAAGTA TGACGAGCTA
TGGACGCGTT TGTTATTCTT AATCGGCGCA TTGATTGTTT ATCGTTTAGG GTCACATATT
CCGGTACCGG GTATCAATCC GGTTAACTTG GCTGATCTGT TTTCGCGCAA CGAAAATACC
ATTCTGAGCA TGTTTAACCT GTTCTCAGGT GGTGCACTAG AGCGTATGTC CATTATGGCA
CTTGGTATCA TGCCATATAT TTCAGCATCG ATTATTGTAC AGATGATGTC TGCAGTATTG
CCATCGCTAG AAGCCCTCAA AAAAGAGGGT GAGGCGGGAC GACGCAAGCT AAACAAGTAT
ACCCGTCAAG GGACGCTTGC ATTGGCTTTA GTACAGTCAT TAGGGATGTG TGCTGGTTTA
ATCAGCCAAA ATCTTACTTT ATCTTCTGGT CTGACTTTTT ATATTCCAGC GGTTACTTCA
TTGGTAGCCG GCGCTATGTT CTTGATGTGG CTTGGTGAGC AGATTACAGA ACGCGGCGTG
GGTAATGGTA TCTCAATGCT CATTTTTGCG AGTATTGTGG CTGGTACGCC GGGTATGATT
TCGCAGTCTA TTGAGCAAGT CAACCAAGGT CAAATGAACT TGATTGTCCT CTTTATCTTT
GCACTGTTAG GTGTCGCGGT TACTGCGGGT ATCGTTTATA TTGAACGTGC CCAGCGCCGT
GTTCCTGTCA ATTATGCGCA AAAACAACAG CAAGGTCGCA AGATTTACGC TCAGCAGCAA
TCACATTTGC CGTTGAAACT AAATATGGCA GGGGTTATTC CTGCTATTTT TGCCAGTTCA
TTATTGTTGT TTCCTGCAAG TTTGGGGCAG TGGGTTGGTC AATCAACCGA TCCTACTCTG
ACGCAAAAGA TATTGCAAAA TATGGCATTG GTGTTGTCCC CAGGACAGCC GCTATATCTG
GTTCTATTTG GTGCAATGAT TATCTTTTTC TGTTACTTCT ATACGGCGTT GGTATTTAGT
CCGCGTGAAG TTGCTGAAAA CCTTAAACGT AGTGGTGCGT ATATCCCAGG TATTCGCCCA
GGACAACAAA CTCAGCGTTA CCTCGATCAT GTATTAAACC GATTGACCTT TATTGGCGCG
ATGTATATGA CGGTTATTTG TTTAATGCCA ATGGTCGTTC AGTCATCGTT TGGTGTGCCG
TTTCAACTTG GTGGTACGTC GTTACTGATT ATGGTGGTTG TGGTGATGGA CTTCATTTCG
CAAATCCAAG CGCATTTGAT GACCCATCAA TATCATGATC AGACGTTAAT TCAATCGCCC
ACTCAACTTT AA
|
|---|
| Protein sequence | MSSTGIPLNP FAFIRKYDEL WTRLLFLIGA LIVYRLGSHI PVPGINPVNL ADLFSRNENT
ILSMFNLFSG GALERMSIMA LGIMPYISAS IIVQMMSAVL PSLEALKKEG EAGRRKLNKY
TRQGTLALAL VQSLGMCAGL ISQNLTLSSG LTFYIPAVTS LVAGAMFLMW LGEQITERGV
GNGISMLIFA SIVAGTPGMI SQSIEQVNQG QMNLIVLFIF ALLGVAVTAG IVYIERAQRR
VPVNYAQKQQ QGRKIYAQQQ SHLPLKLNMA GVIPAIFASS LLLFPASLGQ WVGQSTDPTL
TQKILQNMAL VLSPGQPLYL VLFGAMIIFF CYFYTALVFS PREVAENLKR SGAYIPGIRP
GQQTQRYLDH VLNRLTFIGA MYMTVICLMP MVVQSSFGVP FQLGGTSLLI MVVVVMDFIS
QIQAHLMTHQ YHDQTLIQSP TQL
|
|---|
| |