Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0504 |
Symbol | rplF |
ID | 3514303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 602997 |
End bp | 603530 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637669191 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_263801 |
Protein GI | 71065074 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00191336 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0041563 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTCGTG TGGCTAAAGC CCCAGTGACG CTGCCAAACG GCGTAAGCGT TACTTTGAAC GATCGGCAGG TCGAAGTTAA AGGCAAGAAT GGCAATATGT CTTTACGCCT GCATGAATTG GTCGAGCTGA AACAGGAAGA TGATCTAATC ATTTTCTCAC CTACAGTCGA TTCAAAAGAA GCTATGATGC ATGCTGGCAC CATGCGCTCT TTACTAAACA ACTTAGTAAT AGGCGTTAAC GAAGGCTTTG AAAAACGTCT TCTGTTAATT GGTGTTGGTT ATCGTGCACA AGCTACTGGT AATAAAGTAA CGCTAAACGT TGGTTACTCA CACCCAGTAG AATATACGTT ACCTGAAGGT GTATCAGCTG AAACCCCAAC GCAAACTGAA ATCGTTTTAA AATCAAACGA TAAGCAGCAG CTTGGTCAAG CAGCGGCTAA TATCCGCGGT TTCCGCCCAC CTGAGCCTTA TAAAGGTAAA GGTATTCGTT ATAGTGACGA GCATGTGATT CGCAAAGAAG CCAAGAAAAA ATAA
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Protein sequence | MSRVAKAPVT LPNGVSVTLN DRQVEVKGKN GNMSLRLHEL VELKQEDDLI IFSPTVDSKE AMMHAGTMRS LLNNLVIGVN EGFEKRLLLI GVGYRAQATG NKVTLNVGYS HPVEYTLPEG VSAETPTQTE IVLKSNDKQQ LGQAAANIRG FRPPEPYKGK GIRYSDEHVI RKEAKKK
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