| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0490 |
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| Symbol | rplD |
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| ID | 3514289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 596625 |
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| End bp | 597227 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637669177 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_263787 |
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| Protein GI | 71065060 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000000109229 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0102301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGATTTAA AAACAGTTAC AGGGGCGGCA GTTGAGCTTT CTGATACGGC TTTCGGTCGT
GAATTCAACG AAGCACTAGT GCATCAAGTC GTCACCGCAT ATCTTGCTGG TGCTCGCCAA
GGTACACGCG CTCAAAAAAC CCGTGCCGAA GTTTCTGGTG GTGGCATTAA GCCATGGCGC
CAAAAAGGTA CTGGTCGTGC TCGTGCAGGT TCTATTCGTA GCCCAATCTG GCGTGGGGGC
GGTCGTGCAT TCGCGGCTAA GCCACAAGAT TGGTCACAGA AAGTTAACCG TAAGATGTAT
CGCGGTGCGA TGCAGTGTAT CCTAGCCGAA TTGATTCGCC AAGAGCGTCT GATTTTGGTT
GAAGAGATAA GCGTTTCTGG TCCTAAGACC AAAGAGCTGA TCGCAAAGTT AAATGAGCTT
GGTGCACCTC GTGCATTGAT CGTCACTAAA GAAGTTGACG AGAACTTATA CTTAGCTGCT
CGCAACATCC CACATGTCAA TGTACTTGAT ACAAGTGAAG TGGATCCAGT GAGCTTGATT
GCTTTTGACA AAGTAATCAT GTCAGTTGAA GCTGCGAAAC AATTTGAGGA AGCACTAGCA
TGA
|
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| Protein sequence | MDLKTVTGAA VELSDTAFGR EFNEALVHQV VTAYLAGARQ GTRAQKTRAE VSGGGIKPWR
QKGTGRARAG SIRSPIWRGG GRAFAAKPQD WSQKVNRKMY RGAMQCILAE LIRQERLILV
EEISVSGPKT KELIAKLNEL GAPRALIVTK EVDENLYLAA RNIPHVNVLD TSEVDPVSLI
AFDKVIMSVE AAKQFEEALA
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