Gene Psyc_0487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0487 
Symbol 
ID3514286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp593525 
End bp595111 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content45% 
IMG OID637669174 
ProductRNAse G 
Protein accessionYP_263784 
Protein GI71065057 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1530] Ribonucleases G and E 
TIGRFAM ID[TIGR00757] ribonuclease, Rne/Rng family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.258598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0128564 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAG AGCTGCTGAT TAATATTAGT CCCATGGAAT CCCGTGTCGC CGTATTAGAT 
AACGGTATCT TGGGCGAGAT TTATATTGAG CGTCATCATA AGCTGGGTTT GGTTGGTAAT
ATTTACTTGG GCACAGTGGT GCGTGTTCTG CCGGGTATGC AAGCAGCCTT TGTCGATATT
GGTCAATCAC GTACCGCATT CTTACACGTT AATGATATGC AGCGCGAACC ACGTCCAGTC
GCAAAAAGCA GCAAGATTGA AAAGACTGAT GATGAGCGCA CAATTATAGA GGCGACTGCT
GATGATCTAG CCGTCACGCC GCCTGTAGTA AGTACGCAAA GTACAGAAGC CGTACTGATT
TCGAAAACCC TTATCCAGCA TCGTCTGCAT GAAAGCCAAC GTATTTTGGT ACAAGTGACC
AAAGATCAGC TGGGCAGTAA AGGCGCGCGC TTAACCACCA ATATATCGCT ACCATCACGC
TATCTGGTCT ATTTGCCATC GAGTGATCAT ATCGGCATCT CGCAGCGTAT TGATGGTGAA
GATGAGCGTA CTCGCCTCAA GACTGAGCTG AATAGTCTTA TGCAAACCGT CAATCTTAAA
GGTGGACTGA TTGCGCGTAC GGCAGCTGAA CGGGTACCTG TCGATAAGCT CGAAGAAGAT
ATTTACTATC TTTTGCAATT ATGGCGGACG ATTTGTGCCC GTCACCAAGA GATGAAACAA
CATCAAAGCT CTGAGCTTAT TTATCAAGAA TTGTCACTAC CGCTACGCTC TATTCGTGAT
TTGGTACATG CCGATACCGA AAAAGTGATT ATTGATAATG CGCAGATATA TGAGCAGGTT
AGATACTTTG CCAAAGAATT TGTCCCTTTT GTTTATGATA GAATTGTGCA TTACACAGCT
GAGCAGTCGC TATTTGATGT TCACCGTGTC GAAGATGATT TACGTGATGC GCTCAAACGC
CGCGTTGATT TAAAGTCTGG TGGCTATCTG ATTATTGATC AAACCGAAGC GATGACAACT
ATAGATGTTA ATACTGGCTC ATTTGTTGGT GGACGTTCAC TAGAAGATAC CGTCTATAAG
ACTAATCTAG AAGCCACGCA CGCGATTGCC CGTCAGCTGC GCCTGCGTAA TCTGGGTGGT
ATCATCATCT TAGACTTTAT TGACATGCTT GAGCAGCAGC ATAAAGATGA TATCCTTGAG
AGCTTGCAGT CACAGCTGGT ACAAGATTAT GCCAAAACCA AAATCACCCA AGTCAGTGAG
CTTGGTTTGG TTGAGATGAC TCGTAAGCGT ACCCGTGAGT CGCTTGGGCA GCAGCTATGT
GAGCCGTGCT CGACCTGTCA AGGACGTGGT TTTGTCAAAA CAGCTGAAAC CGTCTGCTTT
GAGATATTCC GTGAAATTAT GCGTTGCGCT CGTACTTACA ACTCTCCCAA AAAGTTTACC
GTTGTCGCCC ATGCAGCTGT GATTGATTTA TTACTGACTT CAGAGTCGGA TACCGTAGCA
GATTTAGAGT ATCTACTCGG TAGAGTGATT ACCTTTGATG TCGAAAATTT ATATACCCAA
GAGCAATATG ATATTGTGTT GGACTGA
 
Protein sequence
MSEELLINIS PMESRVAVLD NGILGEIYIE RHHKLGLVGN IYLGTVVRVL PGMQAAFVDI 
GQSRTAFLHV NDMQREPRPV AKSSKIEKTD DERTIIEATA DDLAVTPPVV STQSTEAVLI
SKTLIQHRLH ESQRILVQVT KDQLGSKGAR LTTNISLPSR YLVYLPSSDH IGISQRIDGE
DERTRLKTEL NSLMQTVNLK GGLIARTAAE RVPVDKLEED IYYLLQLWRT ICARHQEMKQ
HQSSELIYQE LSLPLRSIRD LVHADTEKVI IDNAQIYEQV RYFAKEFVPF VYDRIVHYTA
EQSLFDVHRV EDDLRDALKR RVDLKSGGYL IIDQTEAMTT IDVNTGSFVG GRSLEDTVYK
TNLEATHAIA RQLRLRNLGG IIILDFIDML EQQHKDDILE SLQSQLVQDY AKTKITQVSE
LGLVEMTRKR TRESLGQQLC EPCSTCQGRG FVKTAETVCF EIFREIMRCA RTYNSPKKFT
VVAHAAVIDL LLTSESDTVA DLEYLLGRVI TFDVENLYTQ EQYDIVLD