Gene Psyc_0484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0484 
SymbolmreC 
ID3514283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp590985 
End bp591845 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content45% 
IMG OID637669171 
Productrod shape-determining protein MreC 
Protein accessionYP_263781 
Protein GI71065054 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0223264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCAA GTATTTTTGC TCGCCAGCCA CTCGTGCTTC GTATGACTGC TGTTTTATTG 
ATAGTGGCAT TGATACTGAT GTGGTTTGAT AGCAAAAATC CAGAATGGTT CAATCCTATA
CGCTCAAGCA GCCACGCCGC GATGCAGCCT ATTTATGAGC TGTCATTGCT ACCCAGTTAT
GCCAAACACT GGTCAAGCGG TAGTCTGCAA TCAAAAGAAG CGCTGCGCCG CGAAAATATG
CAGCTCAAAT CGCAGCTTAT TCACGCCCAA GCCAAATTAC AGCAGCAAGA TTATATCTTG
GCGCAAAACG CCCGTTTGCA AGGTATTCTA TCGACCACGA GTCCAGAGCA ATTTGATTTA
AACTTGGCAC AAGTGATTGG TACCGACACC AATCTTTTGC GTCAAATTGT GGTATTGAAT
AAAGGTGCTC AAGATGGGGT GCAAGTTGGA CAAACAGTCA TCGATGAAGA CGGCATCTTA
GGGCAGATTA TTAATGTCTA TCCTAATACC AGCCGTTTAT TACTAATTAC TGATGAGCGG
CAGTCCGTCG CCGTTACTGT CAAGCGGACT GGTCAGCGCG CTATTGTCAC TGGTCAAGGC
ATACCTACCT CATTGAGCCT TGAGTATGTT TTTAAAACCT CAGATGTGCG TGTCGGTGAT
GAACTGGTAT CATCTGGATT AGGTGAGCGT ATCCCTGCAG GCTATCGCGT TGGTCGTATC
GCGCATATTG AAGACACGCA AGCAGATAAT TTTAGAAGTA TTAAAGTCAC TCCTGCGGCA
AACTTTGTTA ATAATGCTTA TGTGCTGATA TTGCAAGACA AGCTGGCTAA TAAAGATAAT
ATTGGCATCA CTGAGCCTTA A
 
Protein sequence
MTPSIFARQP LVLRMTAVLL IVALILMWFD SKNPEWFNPI RSSSHAAMQP IYELSLLPSY 
AKHWSSGSLQ SKEALRRENM QLKSQLIHAQ AKLQQQDYIL AQNARLQGIL STTSPEQFDL
NLAQVIGTDT NLLRQIVVLN KGAQDGVQVG QTVIDEDGIL GQIINVYPNT SRLLLITDER
QSVAVTVKRT GQRAIVTGQG IPTSLSLEYV FKTSDVRVGD ELVSSGLGER IPAGYRVGRI
AHIEDTQADN FRSIKVTPAA NFVNNAYVLI LQDKLANKDN IGITEP