Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0481 |
Symbol | gatA |
ID | 3514280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 587109 |
End bp | 588605 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637669168 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
Protein accession | YP_263778 |
Protein GI | 71065051 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.103288 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGAAC TTCATCTCTT AAGTACCCAG CAGCTCATTA CTGGTCTGCA AGACAAACAA TTTAGCAGCC TTGAGCTGAC TGACCACTAT ATCAAACGTA TCAACGCCCT TGATAGTAAG ATTAACAGTT TTATCACTCA TACCTCTGAG ACAGCACGCA CACAAGCAAA AGCGGCGGAC GAGATGCGCG TGCAAGGTGA TAAGCGACCA TTACTTGGCG TGCCAATGGC GCATAAAGAC ATTTTTTGTA CCCAAGGCGT ATTGACCACC TGCGGTTCTA AGATGCTGCA CAACTTTATC TCTCCTTATG ATGCGACCAT CGTCACTAAC ATCGATAAAG CGGGCATGAT CAGTCTTGGT AAGCTCAATA TGGATGAGTT TGCCATGGGC TCGGACAACG AAAGCTCATA TTACGGTGCT GTGCACAACC CTTGGAACAT AGGACACGTG CCTGGTGGCT CATCAGGCGG TAGTGCAGCA GCAGTGGCGG CGGGATTTGT ACCAGTCGCT ACGGGCAGTG ATACTGGTGG CTCAATTCGT CAGCCTGCCT CATTTTGCGG CTTAACCGGT ATCAAACCTA CTTATGGTCG CGTCTCTCGC TTCGGTATGA TTGCTTATGC CTCCAGTCTT GATCAAGCCG GTAGTATGGG ACGTAGTGCC ATGGACTGTG CCTATCTGTT ACAACCAATG ATTGGTCATG ACCCACGCGA TGCCACTTCT ATCAAATACG ACATGCCTGA TTATGTACAA GATTTAAATG ACGCTGCTGC CAGCGCTGGT GATAAACCGT TTGCCGGCTT GCGTATTGGT GTTGCTAAAG AATACTTTAG TAAAGGACTT GATACTGAAG TCGAACAAGC GGCTCGTGCA GCGTTAAAGA AATACGAAGA GCTTGGCGCG ACCATTGTAG AGGTGACTAT CACTGATCCA GAGATTACTC TTGCCACTTA CTATATGCTG GCACCGGCTG AAGCATCATC GAACCTATCA CGCTTCGATG GTGTACGCTT TGGGTATCGC TGTGAAAACC CAAAAGACTT GATTGACTTA TACACGCGTT CGCGTTCTGA AGGCTTTGGT CCTGAAGTAC AGCGCCGTAT TTTGTCAGGT ACTTATGCGC TATCCGCTGG TTACTTTGAC GCTTATTACA TCAAAGCACA AAAAGTTCGC CGCCTCATCG TCAAAGACTT CGAAGATGCC TTTGCCAATT GTGATGTGAT CGCCAGTCCA ACCGCACCAA CAGCGGCTTA TAAACTTGGT GAAGACCTCG ATCCTGCAAC GATGTATTTG GGTGATGTTT ATACCATTGG TGTCAACTTA GCGGGTCTAC CTGCGCTTAG TCAGCCGGTT GGTTTAACCT CAGCAGGCTT ACCTATTGGT TTGCAATTGA TTGGACAATA TTGGCAAGAA AGCAAATTGC TCTCTACTGC TCATTTATTC CAGCAGCATA CAGATCATCA TTTGCAACAC TCTACCATCG CGAAGGAGAC GGTATAA
|
Protein sequence | MSELHLLSTQ QLITGLQDKQ FSSLELTDHY IKRINALDSK INSFITHTSE TARTQAKAAD EMRVQGDKRP LLGVPMAHKD IFCTQGVLTT CGSKMLHNFI SPYDATIVTN IDKAGMISLG KLNMDEFAMG SDNESSYYGA VHNPWNIGHV PGGSSGGSAA AVAAGFVPVA TGSDTGGSIR QPASFCGLTG IKPTYGRVSR FGMIAYASSL DQAGSMGRSA MDCAYLLQPM IGHDPRDATS IKYDMPDYVQ DLNDAAASAG DKPFAGLRIG VAKEYFSKGL DTEVEQAARA ALKKYEELGA TIVEVTITDP EITLATYYML APAEASSNLS RFDGVRFGYR CENPKDLIDL YTRSRSEGFG PEVQRRILSG TYALSAGYFD AYYIKAQKVR RLIVKDFEDA FANCDVIASP TAPTAAYKLG EDLDPATMYL GDVYTIGVNL AGLPALSQPV GLTSAGLPIG LQLIGQYWQE SKLLSTAHLF QQHTDHHLQH STIAKETV
|
| |