Gene Psyc_0464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0464 
Symbol 
ID3514416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp571959 
End bp573704 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content47% 
IMG OID637669150 
Productphage terminase, large subunit 
Protein accessionYP_263761 
Protein GI71065034 
COG category[R] General function prediction only 
COG ID[COG4626] Phage terminase-like protein, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.281704 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACG TTATTGCTTA CGCTAATATC GCTACGCAAT ACGCCACAGA TGTAGTTGAC 
GGTACGACTG ACGCTTGTGT ATACGTGCGC CAAGCATGCC AACGTCACTT GACGGATCTC
GACCGCGCAA AGAATGAATC CGCATTTGAG TTTGAATTCA ACAGTCAGCT GGCCGCAAAA
GCTTGCCGAT TCATAGAGCT ACTGCCACAC GTCAAAGGTG AGCTAGCAAA CCGGCGCGAA
CTAATACTAC TTGAGCCTTG GCAAATATTT ATCATCGCCA ATTTATTTGG CTGGGTCGAT
TTTGATGGCA AACGCCGTTT CCGCTATGCA TATGTCGAAG TACCTAGGAA AAACGCTAAG
TCTACACTGG CTGCTGGCAT CGGATTATAT CTCGGATTTG CAGACGGTGA GATGGGTGCA
GAAGTTTACT CAGCTGCTAC CACCCGCGAC CAAGCACGAA TAGTTTTTGA AACCGCGCAA
AGCATGGTAC GCAAACGCCC CGATATGCAA AAAGCGATGG GCATAGAGGT GTCGGCTCAC
GCTGTCAGCT CTATTGCTAC TGCATCAACA TTTAAAGCCG TCAGCCGCGA TTATGGTGGC
AATCTTGACG GTCTAAACGT TCAAGGCGCT CTCATCGATG AGCTACACGC TCACAAATCA
AATGATACGT ATGAGGTAAT GGCCACCGGT ATGGGCGCAC GTGAGCAACC ACTCCTATTC
GCTATTACGA CGGCGGGGTT TATCTTAGAT GGGGTCTGCT ATGAACAGCG GACGCTAGTC
ACTAAAGTTT TATCAGGACT TGAGTCACAT GACCGTTATT TTGGCATTAT CTATACGATA
GATGAGGCTG ATGATTGGCG TGACCCACAA AGCTGGCGCA AGGCAAACCC AAACTATGGC
ATATCAGTAC ATAAAGATGC ATTACAAGCG GAATATCAGC GTGCTGCGAT CAGCCCTGAT
GCACAAGCTG ACTTCTTAAC CAAGCATTTA TGCGTTTGGG TCGCCGCTCG TAGCGGTTGG
CTCAACATGC AAGATTGGGA TGACGCCGCT GACAAGACTT TAGTTGCTGG GCTTTTTGAT
AAATACCCAT GCTTTGGCGG TCTTGATTTG GCGTCCAAAG TCGATTTGGC AGCGCGTATC
AAACTATTTG TCAAAAAAAT AGATGATGAA TCTCATTACT ACTTATTTGC TAACTTCTAC
ATTAACCGCG CACAGTTGGA CAACGCCAAC AACGCAAATC AAAAACGTTT TATCGAATGG
GAGCGCCAAG GTTGGCTCAC AGTCACTGAT GGCAACATTA CTGACTTTGA AAAAATCGAA
CGCGATATCA TTCACGATTC AACGCAGTAT GACATGCAGG AAACGGGTTA CGATCCTTTT
AATGCGACCT ATTTAGCCAT GCGTCTTAAT GAGCAAGGTC TCAATATGGT TGAGGTGCCG
CAGCGTGTCG CTTACCTCAG CGAACCGATG AAACATCTAC AAGCGCTATT AACATCCAAG
CGCGTGCATC ATGATGGCAA TCCTATACTG CGCTGGTGTA TGGGCAACGT CACTGTCAAA
AAAGACGCCA ATGACAATGT CTTCCCTCGT AAGGAATCAG ATGCCAATAA AATTGATGGC
GCTGTCGCTG CCATCATCGC GACCAACCGC GCCCAGTATT ATGACGAGAC AGGCGATTTG
CCTAGTAAAG ATTTTGAATC GCAGCTGGGC GACTACTTAA CCGACTTTGT AAGCTTTAGG
GGATAA
 
Protein sequence
MSDVIAYANI ATQYATDVVD GTTDACVYVR QACQRHLTDL DRAKNESAFE FEFNSQLAAK 
ACRFIELLPH VKGELANRRE LILLEPWQIF IIANLFGWVD FDGKRRFRYA YVEVPRKNAK
STLAAGIGLY LGFADGEMGA EVYSAATTRD QARIVFETAQ SMVRKRPDMQ KAMGIEVSAH
AVSSIATAST FKAVSRDYGG NLDGLNVQGA LIDELHAHKS NDTYEVMATG MGAREQPLLF
AITTAGFILD GVCYEQRTLV TKVLSGLESH DRYFGIIYTI DEADDWRDPQ SWRKANPNYG
ISVHKDALQA EYQRAAISPD AQADFLTKHL CVWVAARSGW LNMQDWDDAA DKTLVAGLFD
KYPCFGGLDL ASKVDLAARI KLFVKKIDDE SHYYLFANFY INRAQLDNAN NANQKRFIEW
ERQGWLTVTD GNITDFEKIE RDIIHDSTQY DMQETGYDPF NATYLAMRLN EQGLNMVEVP
QRVAYLSEPM KHLQALLTSK RVHHDGNPIL RWCMGNVTVK KDANDNVFPR KESDANKIDG
AVAAIIATNR AQYYDETGDL PSKDFESQLG DYLTDFVSFR G