Gene Psyc_0462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0462 
Symbol 
ID3514607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp569983 
End bp570729 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content49% 
IMG OID637669148 
Productprohead peptidase 
Protein accessionYP_263759 
Protein GI71065032 
COG category[R] General function prediction only 
COG ID[COG3740] Phage head maturation protease 
TIGRFAM ID[TIGR01543] phage prohead protease, HK97 family 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.523107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGC ACTCACTGCA AACGATGAGA TGTCGAGATG GTCGCAGTGA GCTGCTGCAA 
TCTGTCAGTA CGCGCCGCAT GCCTATCATT GATACTAAGA TACGATTTGC TGAGCCTGGC
AAAGACGGCG CCGCAACTTA CACGTTTGAA GGCTACGCGG TCAAATGGGA CAGCATCAAC
TTACATGGCG AAAAATTCGC CCGTGGCGCG TTCTCGGATA TGATTACTGC ATTCGAAAAT
GACGCTAAAA CAGTGCATAT GTACTACAAC CACGGTTGGC GCAACATGTT TGACCTTAAT
GCTGCCATGC GTGTTGGTCG GTGGGTAGAA TTTGAGGAAG ACGACATCGG GCTGCGCGTC
AAAGGCGAAC TAACCCAAGG CTTGCCATTG GCAACCGCAG TCGGCGCCAT GATGCGACAC
CTGACTGTTG ATGGCTTGTC TATCTGTTTT TACAACCCAA CTGAAATGGA TTATGAAGAG
CAAGAGGGTC ACATTCTTAT CAAGCGCGCA GATTTATTTG AAATCAGTGT CGTTGATGAG
CCAAGCGACC GTAGTGCCCG CGTCAACCGA CAGTCTGAGA CCATTAACAA TCTAGCCGAT
GAGCGTGATG CTTGCGACAT GCTGACTAAG CTAGGGCTCG ACCAAGCCGA CGCACGACAT
TTTATTACCA AACTCGACAG CATCATGGGC ACCAGCGCTG ATGATACTAG CAAAGATAAC
GACCCGTTTG CCTTTTTAGA CTCTTAA
 
Protein sequence
MNKHSLQTMR CRDGRSELLQ SVSTRRMPII DTKIRFAEPG KDGAATYTFE GYAVKWDSIN 
LHGEKFARGA FSDMITAFEN DAKTVHMYYN HGWRNMFDLN AAMRVGRWVE FEEDDIGLRV
KGELTQGLPL ATAVGAMMRH LTVDGLSICF YNPTEMDYEE QEGHILIKRA DLFEISVVDE
PSDRSARVNR QSETINNLAD ERDACDMLTK LGLDQADARH FITKLDSIMG TSADDTSKDN
DPFAFLDS