Gene Psyc_0447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0447 
Symbol 
ID3514592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp557921 
End bp559009 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content42% 
IMG OID637669133 
ProductRNA-directed DNA polymerase (Reverse transcriptase) 
Protein accessionYP_263744 
Protein GI71065017 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTTTTT TAAGGATTGT TATGAAAAGG ATTGGTAACT TATACGAATC CGTAGTCTCA 
GGCGAATCAT TATGGGAAGG CTATTTGGGC GCAAAGAAAA GTAAGGGTGG TCGACGTGGG
TGTTTTCAGT TTGAGAAAAG CCTAGGCCGC GAGCTAAATG AATTACAAGA AGAGTTGGCA
AATAACACCT ACAAACCAAG ACCTTATTTT AAATTTATAG TATATGAGCC AAAAAAGCGG
GAGATATATG CCCCAGCATT TAGGGATTGT GTTGTGCAAT ATGCAATCTA TTTAAGAGTC
ATGCCAATAT TTGATAAAAC ATTTATAGAC CAGTCGTTTG CCTGTCGCAC CGGACTTGGG
ACACACAAAG CAGCTGAGTA TGCACAAGAC GCACTTAGAA GAGCCGGCCC CAATACCTAT
ACGCTACAGT TGGACATAAA GAAGTTCTTT TACAGCATAG ACAGACCGAC TCTCAGAAAA
TTATTAGAAA GAAAGATTAA GGATAAGCGC TTGGTCGATT TGATGATGTT GTTTGCGGAC
TATCCCGAAC CCAAAGGCAT ACCAATTGGC AACCTACTAT CGCAAATGTT TGCGCTGATA
TACATGAATC CTGTAGACCA CTACGCCACA CGAGTGCTGA AGCCAGCCGC CGGGTATTGT
CGTTATGTGG ATGACTTCTT ATTGTTTGGC TTGACCAGAG CGCAAGCGCT GACTTACAGA
AAGCTCCTAA CGGATTTTGT AGAACAAAAG CTCAAACTGA CCTTATCACG ATCAACGATA
GCCAATACCA AAAGAGGCGC TAACTTCTGT GGCTATAGAA CATGGCGCTC CGGAAGATTT
ATTAGAAAGC ATAGCTTATA CAAAACTAGA AAAGCCGTAA GGGCCAATAA ACTGGAATCT
GTTATATCGC ATCTTGCGCA TGCTTCAAAA ACTCATTCAT TGCAACATCT ACTAAATTAC
GCGGAGCAAC AAAATCATGG CTTATATTGT CAGCTACCAA AAATTTATCA CACGCGACAT
CACCAAGCAG TTGAACGCTC CGGAAGAATC AACGGAGTTA TGCGCAATCG ATGCAGTAAC
GTATGTTAG
 
Protein sequence
MFFLRIVMKR IGNLYESVVS GESLWEGYLG AKKSKGGRRG CFQFEKSLGR ELNELQEELA 
NNTYKPRPYF KFIVYEPKKR EIYAPAFRDC VVQYAIYLRV MPIFDKTFID QSFACRTGLG
THKAAEYAQD ALRRAGPNTY TLQLDIKKFF YSIDRPTLRK LLERKIKDKR LVDLMMLFAD
YPEPKGIPIG NLLSQMFALI YMNPVDHYAT RVLKPAAGYC RYVDDFLLFG LTRAQALTYR
KLLTDFVEQK LKLTLSRSTI ANTKRGANFC GYRTWRSGRF IRKHSLYKTR KAVRANKLES
VISHLAHASK THSLQHLLNY AEQQNHGLYC QLPKIYHTRH HQAVERSGRI NGVMRNRCSN
VC