Gene Psyc_0445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0445 
Symbol 
ID3514590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp556066 
End bp556815 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content43% 
IMG OID637669131 
Productprophage LambdaSo, tail assembly protein K 
Protein accessionYP_263742 
Protein GI71065015 
COG category[R] General function prediction only 
COG ID[COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATATCT TAAAAGACGC TAAAGACGCA ATGCTCAATC ATGCCGCTGC TTGCTACCCT 
CATGAGTGCT GTGGCCTGTT GGTGAATCGT CAGTATATCG AGTGCGAAAA CATAGCAGAC
AATGATAGTG AGTTTAAGAT CAACCCTCGT GATGTTGTGC GAGCTGAGAA ACTAGGTAAG
ATTGAAGCTA TTGTACATAG TCATCCCAAC GGCAGCACCA AACCCAGTAC TTTTGATTTA
ATACAAATGC AACATCATAA CGTGCCGTGG ATCATCGTCG CTTATCCTGA GATTGACATA
AAAGTACATG CTGTCAAAGA CTATAAAGCA CCTTTAATCA ACCGTGAATA CATACACGGT
GTCTTGGACT GCTTTAGTAT CGTGCGTGAC TACTATAGCC GTGAGCTTGA TATACAGATT
GATAACTTTG AGCGTCAAGA TAAATGGTGG GAATCAGTTA GCAATGCTGA CTTGTACGTT
GACAACTTTG CCTCACAAGG ATTCGTACAA GTTGATAGTT TACAGCGCCA CGATGTTATC
TTATGCCGTG TGCAGCCAAC TGAGCATGTT AATCATGCGC TGATTTATCT TGGTGACAAT
GGCAGCTTAA CGAGCGAGCA ATCAGAAAAA GTCATTAACG ATCATTTGGT ATTGCATCAT
CCCTATATGC GTCGCAGTCG TCGTGAAATA TACGGCAATG TGTGGCAACA GCGCAAAGCT
ATCATTGTGC GGCATAAGTC GCTGATGTGA
 
Protein sequence
MYILKDAKDA MLNHAAACYP HECCGLLVNR QYIECENIAD NDSEFKINPR DVVRAEKLGK 
IEAIVHSHPN GSTKPSTFDL IQMQHHNVPW IIVAYPEIDI KVHAVKDYKA PLINREYIHG
VLDCFSIVRD YYSRELDIQI DNFERQDKWW ESVSNADLYV DNFASQGFVQ VDSLQRHDVI
LCRVQPTEHV NHALIYLGDN GSLTSEQSEK VINDHLVLHH PYMRRSRREI YGNVWQQRKA
IIVRHKSLM