| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0440 |
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| Symbol | |
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| ID | 3514238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 550716 |
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| End bp | 551261 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637669126 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_263737 |
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| Protein GI | 71065010 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.000507324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTACAG TCGTAATTAC AGCAGGTCAC AGCAACACAG ATCCGGGAGC CGTAAACGGC
AACATCACTG AAGCAGAAAT CGCAACTGAT ATGCGAAATA TGGTCACGCT TTATCTTGAG
CGCAAAGACA TCGATGTCGT TACGGACGGC AATGGTAGTG ACAATCAAAC GCTTCGCAAT
GCTATCAAGT TGATCAAACA AGGCAAAGTT GCTATCGAGT TTCACTGTAA CGCGTTTCAC
TTGCCGACAT CGGGTGGTGT CGAAGCCTTA GCACAGCCAA AAGACAAGGT CATCTGTCAA
AAGCTATGCG AAGCAGTCAG TGATATTATG GGTATTCCAG TGCGCGGTCC TGCCGGTGGT
TTTAAAGCCG AAAATAGTGG CCAACATTCA CGGCTTGGCT ACGTGCGCGG CGGTGGCATC
ATCTTAGAGT TGTTTTTTAT CTCTAATCCC CTTGAACTCG CCACCTACCA GGCCAAAAAG
TGGCTAATTG CTCGTGAGCT TGCTGATGTC ATCGCTGAGC ACGTCGGCAT TGGCTGCAAA
GCTTAA
|
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| Protein sequence | MTTVVITAGH SNTDPGAVNG NITEAEIATD MRNMVTLYLE RKDIDVVTDG NGSDNQTLRN
AIKLIKQGKV AIEFHCNAFH LPTSGGVEAL AQPKDKVICQ KLCEAVSDIM GIPVRGPAGG
FKAENSGQHS RLGYVRGGGI ILELFFISNP LELATYQAKK WLIARELADV IAEHVGIGCK
A
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