| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0432 |
|---|
| Symbol | trpB |
|---|
| ID | 3514230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 541376 |
|---|
| End bp | 542650 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637669118 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_263729 |
|---|
| Protein GI | 71065002 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCATG TCGCTAACAA AGATTTATCT ACTACCGCAC AAACTATCAA TACCTTTACC
AATCCAGAAA GCGTGCAAGA TTTTAACCAG TATCCCGATG CGCGTGGACA TTTTGGCGTC
CACGGTGGAC GCTTTGTGTC TGAAACCCTG ATGGCAGCGT TAGAAGAGCT AGAAACGTTA
TATAATAAAG TCAAAGTAGA TCCTAAGTTT TGGGAAGAAT ATCACAATGA TTTAGTCAAT
TACGTCGGAC GCCCAACGCC TTTGTATCAC GCCAAGCGTT TAAGTGATGA GATTGGCGGT
GCGCAAATTT ACTTCAAGCG TGAAGACCTC AATCATACTG GCGCGCATAA GGTGAATAAT
ACCATTGGAC AAGCGTTACT TGCCAAAATG AGTGGCAAAA AACGTATTAT TGCAGAGACT
GGAGCAGGGC AACATGGTGT TGCAACGGCG ACGATTGCTG CGCGTTTGGG ACTGGAATGT
ATCGTTTATA TGGGCGCTGA TGATGTTGAG CGCCAAAAAA TGAACGTTTA CCGTATGCGC
TTGCTGGGTG CGACGGTTGT GCCGGTGACA TCTGGCTCTC GTACACTTAA AGATGCGATG
AATGAAGCCA TGCGCGACTG GGTCACCAAT GTCGATAGCA CGTATTATAT TATTGGTACG
GTTGCAGGTC CGCATCCTTA TCCGCTACTC GTGCGTGATT TCCAAGCGAT TATTGGTAAA
GAAGCGCGTA TTCAACATTT ACAAATGACT GGTAAATTAC CAGATGCGCT GGTGGCTTGT
GTTGGCGGTG GTTCTAACGC CATTGGTCTG TTCTTTGACT TCTTAAATGA TACGGAAGTT
AAAATGTATG GCGTTGAAGC AACAGGTGAT GGTATTGAAA CCGGTCGCCA TTCAGCACCA
CTTGCAGCAG GTCGTATCGG TGTATTACAC GGTAACCGTA CGTATTTGAT GGCGGATGAC
GAGGGTCAAA TTCAAGAAAC GCATTCTATC TCGGCAGGTC TTGATTATCC TGGCGTTGGT
CCTGAGCATA GCTTCTTAAA AGATATGAAG CGTGTTGAAT ATGTTGGTTG TACGGATAAA
GAATCGCTAG AAGGCTTCCA TGAAGTCACG CGTAAAGAGG GTATCATCCC TGCGCTTGAA
TCTGCTCACG CCGTTGCTTA TGCGCTGAAG CTCGCTAAGA CCATGACCCC TGACCAAACT
ATTATTGTCA ATATGTCAGG TCGCGGCGAT AAAGATTTGC ATTCTGTTAT GAAGGCAGAA
GGCATTGAGT TGTAG
|
|---|
| Protein sequence | MSHVANKDLS TTAQTINTFT NPESVQDFNQ YPDARGHFGV HGGRFVSETL MAALEELETL
YNKVKVDPKF WEEYHNDLVN YVGRPTPLYH AKRLSDEIGG AQIYFKREDL NHTGAHKVNN
TIGQALLAKM SGKKRIIAET GAGQHGVATA TIAARLGLEC IVYMGADDVE RQKMNVYRMR
LLGATVVPVT SGSRTLKDAM NEAMRDWVTN VDSTYYIIGT VAGPHPYPLL VRDFQAIIGK
EARIQHLQMT GKLPDALVAC VGGGSNAIGL FFDFLNDTEV KMYGVEATGD GIETGRHSAP
LAAGRIGVLH GNRTYLMADD EGQIQETHSI SAGLDYPGVG PEHSFLKDMK RVEYVGCTDK
ESLEGFHEVT RKEGIIPALE SAHAVAYALK LAKTMTPDQT IIVNMSGRGD KDLHSVMKAE
GIEL
|
|---|
| |