| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0424 |
|---|
| Symbol | |
|---|
| ID | 3515076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 528255 |
|---|
| End bp | 531563 |
|---|
| Gene Length | 3309 bp |
|---|
| Protein Length | 1102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637669109 |
|---|
| Product | type I restriction enzyme, R subunit |
|---|
| Protein accession | YP_263721 |
|---|
| Protein GI | 71064994 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAACG CGCACAACGT CACTTATGAA TCTGTCTTTC AAGCCGATAT CGTCAGCCAG
ATGCAAGCGC AAGGCTGGCA GTTGGGTCAT GCCAGTGGCT ATCAGGCAGA GACTGCGCTA
TATGAGCAAG ACGTGCTGGA CTTTGTACAG AGCACCCAGC CGCAGGAATG GGAAAAGTTT
TGCCGCACCT TTCCTATCGA CTCTGAGCGT CATTTTATCA CCGCATTAGT CAAGCAGCTT
AATAAAGCGG ATGAGCACTC AACCGATAGA GCCTCGCGCA CTTATGGCAC CTTGGGTGTA
TTACGTCATG GCCTTAAGAT TCGTAACGCG CGTTTCTCAT TATGCCAGTT TAAGCCTGAG
CACAGCCTTA ACCCTGAGAC CATGACACGC TATGAGGCCA ATATTTGCCG TGTTGTCTCT
GAGGTGATCT ATAGCCCTCA TGTCAGTCTT AAAGATAGCC CAAAAGACAA AACAGACGGT
AAGGTCGCTA AGCGTAACCG TATCGACATC GTACTATTCG TGAATGGCTT GCCTGTCACA
ACGATGGAGC TAAAGTCTGA GTTTAAACAA GCGGTACAAA ATGCTATTAC TCAATATAAG
AAAACACGCC TGCCTAAAGA CCCTGATACT AAGAAACCTG AGCCGCTACT AACGTTTAAG
CGCGGCGCAT TGGTGCACTT TGCTGTCAGT CAGTATGAAG TCTATATGAC AACGAAGCTG
GCAGGGGATA GCACCTATTT CTTACCGTTT AATAAAGGCA CAGAGCATGG CGGTGCGGGT
AATGATACGC CTAGTGATAG CAGCCGCTAT GCCACCGATT ATCTATGGAA TGAAGTACTT
ACGCCAGAGA ACTTACTCTC GATCCTTGGG CATTTTATGC ACTTGCAGAT CGACGAGGAA
GAAGACGCAA TCGGTCGCAA GTCCAAAAAA GAGATATTGA TGTTCCCGCG TTATCATCAG
TGGGATGTGG TGACCAAATT GGTTAATGCT GCCGTGACTG AGGGTGCTGG TCAAAAGTAT
CTGATTCAGC ATAGTGCTGG TTCAGGTAAG TCTAACTCTA TTGCATGGAC AGCGCATCAG
CTCTCAACCT TGTATAACGA TCAAGGCGAT AAACAGTTTC ACTCTGTCAT TGTCATCACC
GATCGCACGA TACTTGATGA CCAGCTACAA GAAACCATCT ATCAGTTTGA ACATGCTGAT
GGTGTGGTCG GCAAGATCAA TAGAAAAGAA GGTGACGGCT CAAAATCTGA AAAACTTGCC
GAAGCATTAG TGAACTCGCA GCCGATCATC ATTGTCACTA TTCAAACCTT TCCGTTTGTG
CTTAAGGCGA TTGAAGATTC AAGTGTGCTC AAGTCGCGCC GCTATGCCAT CATCGCTGAT
GAAGCACATT CATCACAGAC AGGCTCTACG GCTCGCCAGC TTAAAGAAGT GTTGGTCTCA
GGTGATATAG AGAGTAATAC AGACGATGAC AAGCCGCTAT CTAGCGAAGA TAGCCTTGAT
TTCATACTGG ATGCCACGCT TGCCGCGCGC CGTAGTAGTC CTAACCTAAG CTACTATGCC
TTTACCGCCA CGCCTAAGCC AAAAACCATT GAGCTATTTG GGCGTCTGCC TAATCCTGAC
TTGCCAGCAT CGAAAGATAA CTTACCAGCC GCTTATCATG TCTATTCCAT GCGCCAAGCC
ATTGAAGAGG GCTTTATCTT AGATGTGCTA AAAAACTACA CCAACTACAA AGTGGTCTAT
CAGCTTAAGC AAAAGCTGGC CGCCGCTGAT GATGAAGTCG ATGCTCGCCG CGCCAAGATT
AAGCTCAATA GCTGGGTACG CTTGCATGAA CACAATATCG CCCAAAAAGT AAAAATCATC
ATTGAGCACT TTAATGACAA CATCAAAGGT TTACTTGGCG GACAAGCCAA AGCCATGGTG
GTGACGGGTT CACGTAAAGA AGCGGTACGC TATAAGATAG CCTTTGATAA CTATATCGCT
GATTACGGTT ACAGAAATAT CAATGCTATG GTTGCGTTCT CAGGTGAAGT CACCTTTAAC
GACAATGATC CTGATAGCGG CGCACTTATC GGTGAGAAGT TCACTGAACA CAATATGAAC
ATCGGGCTAA AAGGCCGCGA TCTACGTAAA GCGTTTGATA GTGATGACTA TCAGGTGATG
TTGGTGGCTA ATAAATTCCA GACAGGCTTT GACCAGCCTA AACTATGTGC CATGTATGTT
GATAAGAAGC TGACAGGCGT GGATTGCGTG CAGACACTCT CACGACTGAA CCGTACCTAT
AAGGGCAAAG CAGAGAGTGG CACGTTTGTG CTCGACTTCT TTAATGATCC TGAGGATATT
CTTGAAGCCT TCCAGCCGTA CTATGAGACC GCACACCTAG CAGATGTATC TGACCCTGAT
CAGGTGTTTG ACCTTTATGA GAAGCTGCGC GTTAGTGGTA TCTTCACTAA GAACGAAGTC
GAGCAGTTTG TTGAAGCGTT CTATAGTAAG AATAAGTCTA ATGCCGCCAT TAGCAATATC
TGCAAGCCAG CGGTCGAGCG TTGGCAGAAG CAATATCATA AAGCGCGTAC AAAAGCACAG
CATGCTAAAA CGATGCTTGA GCGCACCAAA GCAACGGGCG ATGTGGTACT GATGACCAAT
GCTGAAAACG ACTACAAAGG CTTTAAGACA GATCAAGATG CGCTGGAAAT CTTTAAAAAG
GACTTGGGTA CATTCACCCG TCAATACGAG TTTATGTCGC AAATCGTTGA CTATGATTCT
AAAGACTTAG AGAAGCTGAG CCTATACGCG CGTAACCTAC AGCCGTTACT GCGTGAAAGC
CTAGATAATG AAGAGGATGT TGATCTAAGT AATATCGTGA TGAGCCATTA CCGCGTCTCA
ATTCTCCATC AGCAGGACTT GAAACTACAA GAGGGCAAAT CTGAATATCA ATTAGATGGT
GGCAGCGGTG CAGGTACGGC AACCCCTAAA GATATAAAAG AAGCGTTTTT ATCGCAGATC
ATTGAGCGCT TGAATGAGGT GTTTGTAACG GACAATCTCA CAGATAAAGA TATGCTTAAC
TATGCACACA CTTTACGTGA CAAGCTATCT GAAAATACTA TCGTAATGAC TCAAATTGCT
AGTAACCCAA AGGCGCAAGC ACTGCTAGGT GATTTTCCAA ACGCTCTAGA TGATGCTGTT
ATAAGTAGCG GTGCGGCGCA TCAAGAACAG ATGATACAGT TACTTTCAGA TCCCGCAAAA
ATGACTGCAA TCGGTAGAGT GGTGTATGAC ATGTTATGTG TGAACAGTGA AAAAGCGAAA
TACATCTAA
|
|---|
| Protein sequence | MANAHNVTYE SVFQADIVSQ MQAQGWQLGH ASGYQAETAL YEQDVLDFVQ STQPQEWEKF
CRTFPIDSER HFITALVKQL NKADEHSTDR ASRTYGTLGV LRHGLKIRNA RFSLCQFKPE
HSLNPETMTR YEANICRVVS EVIYSPHVSL KDSPKDKTDG KVAKRNRIDI VLFVNGLPVT
TMELKSEFKQ AVQNAITQYK KTRLPKDPDT KKPEPLLTFK RGALVHFAVS QYEVYMTTKL
AGDSTYFLPF NKGTEHGGAG NDTPSDSSRY ATDYLWNEVL TPENLLSILG HFMHLQIDEE
EDAIGRKSKK EILMFPRYHQ WDVVTKLVNA AVTEGAGQKY LIQHSAGSGK SNSIAWTAHQ
LSTLYNDQGD KQFHSVIVIT DRTILDDQLQ ETIYQFEHAD GVVGKINRKE GDGSKSEKLA
EALVNSQPII IVTIQTFPFV LKAIEDSSVL KSRRYAIIAD EAHSSQTGST ARQLKEVLVS
GDIESNTDDD KPLSSEDSLD FILDATLAAR RSSPNLSYYA FTATPKPKTI ELFGRLPNPD
LPASKDNLPA AYHVYSMRQA IEEGFILDVL KNYTNYKVVY QLKQKLAAAD DEVDARRAKI
KLNSWVRLHE HNIAQKVKII IEHFNDNIKG LLGGQAKAMV VTGSRKEAVR YKIAFDNYIA
DYGYRNINAM VAFSGEVTFN DNDPDSGALI GEKFTEHNMN IGLKGRDLRK AFDSDDYQVM
LVANKFQTGF DQPKLCAMYV DKKLTGVDCV QTLSRLNRTY KGKAESGTFV LDFFNDPEDI
LEAFQPYYET AHLADVSDPD QVFDLYEKLR VSGIFTKNEV EQFVEAFYSK NKSNAAISNI
CKPAVERWQK QYHKARTKAQ HAKTMLERTK ATGDVVLMTN AENDYKGFKT DQDALEIFKK
DLGTFTRQYE FMSQIVDYDS KDLEKLSLYA RNLQPLLRES LDNEEDVDLS NIVMSHYRVS
ILHQQDLKLQ EGKSEYQLDG GSGAGTATPK DIKEAFLSQI IERLNEVFVT DNLTDKDMLN
YAHTLRDKLS ENTIVMTQIA SNPKAQALLG DFPNALDDAV ISSGAAHQEQ MIQLLSDPAK
MTAIGRVVYD MLCVNSEKAK YI
|
|---|
| |