| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0421 |
|---|
| Symbol | |
|---|
| ID | 3515073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 526062 |
|---|
| End bp | 527150 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637669106 |
|---|
| Product | chalcone synthase |
|---|
| Protein accession | YP_263718 |
|---|
| Protein GI | 71064991 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3424] Predicted naringenin-chalcone synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.299605 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGCA GTATTACCGC CATTGGAACC GCAGTCCCGC AGCATAAATT CAAGCAAAGT
GAAGCCGCAG CGATCATTTC AGAACGGTTG CAATTGATTC CCGCAAAAAA AAGACTGCTT
AGATTTATTT CTAAAGCGAC GGGTATTGAA TCGCGGCATA GTGTCATCAG CGATATGGGG
CATCTCTCAA ATTCCAAAAG TGACATATCA TCACCTGATT TAACCACAGC AGGCCGGATG
GCACTTTATA AAGAGCATGC GCTGCCGTTA GCCGTTTCTG CTATCAAGCA ATGTATGGAA
CAGTCCGATG CCACATTCGC CGATATTACA CATGTTATTA CAGTCAGTTG TACAGGCATG
TATGCGCCCG GCTTAGATAT TGAAATTGTG CAGCAATTAA AATTGCGCAC CGATGCCAAA
CGCACGGCAA TTAATTTTAT GGGATGTTAC GGTGCCTTCA ACGCATTGAA GGTGGCAGAT
GATGCCTGTC GCGCGAATAA AGAGGCTGTT GTTTTAGTTG TGAGTGTTGA ACTTTGCAGT
CTGCATTTTC AAAATGATGA TGATTTGGAT CATCTACTTT CAAATGCGAT TTTTGCAGAT
GGTGCAGCAG CGGCACTGAT TCAGCCTATG GCTGAGAATC GGAAGAGCCT ATCGATCGAG
GCCTTCAATT GTGATTTATT ACCACAGACC AGCGAAGATA TGGCATGGCA TATAGTAGAT
TCAGGGTTTG ATATTGTTTT GAAATCCTAT ATTCCAGAAG TGATTGAGTC AGGGATTGCG
GAGTTTATGG AGAAACTATT GAAACAGGAA GCGATCACCG ATGTTAATCA CTATGCAATT
CATCCAGGCG GTATGAAAAT ACTGCAAGCC TGTGAAACAG CGTTGAATAT TACAAAAGAC
AAAAACAAGC ATGCTTATCA TGTGATGCGT GAGTATGGAA ATATGTCATC AGCCACCATT
TTGTTTGTTT TGAAAGAATT GATGACCCAC TTGACGAGTG AGAATCATCA AGAAACTATT
TTTAGTTGCG CTTTTGGGCC TGGATTAACC TTAGAATCAA TGTTACTTAA GATAAACCAG
CCGAATTAA
|
|---|
| Protein sequence | MKSSITAIGT AVPQHKFKQS EAAAIISERL QLIPAKKRLL RFISKATGIE SRHSVISDMG
HLSNSKSDIS SPDLTTAGRM ALYKEHALPL AVSAIKQCME QSDATFADIT HVITVSCTGM
YAPGLDIEIV QQLKLRTDAK RTAINFMGCY GAFNALKVAD DACRANKEAV VLVVSVELCS
LHFQNDDDLD HLLSNAIFAD GAAAALIQPM AENRKSLSIE AFNCDLLPQT SEDMAWHIVD
SGFDIVLKSY IPEVIESGIA EFMEKLLKQE AITDVNHYAI HPGGMKILQA CETALNITKD
KNKHAYHVMR EYGNMSSATI LFVLKELMTH LTSENHQETI FSCAFGPGLT LESMLLKINQ
PN
|
|---|
| |