| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0416 |
|---|
| Symbol | |
|---|
| ID | 3515068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 520957 |
|---|
| End bp | 522330 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637669101 |
|---|
| Product | type I restriction-modification system S subunit |
|---|
| Protein accession | YP_263713 |
|---|
| Protein GI | 71064986 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0732] Restriction endonuclease S subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0531711 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAT TGGTAACGAA GTATCAGCGG TATGCAGAAT ATAAGGATTC GGGTGTTGAG
TGGTTGGGGA AGATTCCAAG TCACTGGGAG CTTAGTAAGC TTAGATATAT GTTTTCGTTT
GGTCGAGGTT TAACTATAAC TAAAGCAGAC CTCTTAGATA CTGGTGTACC TTGTGTAAAT
TATGGAGAAG TTCATTCAAA ATATGGTTTC GAGGTTGATC CAAAGAGACA TTATTTAAAG
TGTGTTGATG AAGGGTATTT ACAGTCATCT CCTTATGCTT TGCTTACTCA AGGCGATTTA
GTATTTGCTG ATACTTCTGA GGATATAGAA GGTTCAGGAA ACTTTACCCA GTTAGTTAGT
GATGATTTAA TTTTTGCTGG TTATCACACA GTTATTGCTC GCCCTTTTGA TCGTCAATGT
AGTCGCTTTT ATGCCTATTT AATGGATTCT AAGGAAATAA GAACTCAAGT TAGACACATG
GTAAAAGGCG TTAAAGTTTT TAGTATTACC CAGTCTATTT TGAAAGGGGT TAGGATTTGG
TTGCCATCTT TAGATGAAAG AGAAACTATA GCCAACTTCC TCGACTTTGA AACCGCCCAA
ATCGACACCT TAATTGATAA GCAGAAAACC CTTATTCAAT TGTTAAAAGA AAAGCGCCAA
GCCGTGATCA GTCATGCGGT GACCAAAGGC TTAAATCCTG ACGCGCCGTT GAAAGACTCT
GGTGTTGAAT GGTTGGGGGA AGTGCCTGAG CATTGGGGTG TTTCTAAATT AAAATACTTG
ATAAGTGAGC CTCTACAGTA TGGTGCTAAT GAAGCTGCAG AAGATGTTGA TAAAACTCAA
CCAAGATTTG TAAGAATAAC GGATGTGTTG CCTAATGGTA ATTTGAAAGA TGATACTTTT
AGGTCACTAC CTCAAGAAAT TGCCGAGCCA TATATGTTAA TGGATGGTGA CGTACTGCTG
GCTAGAAGTG GTGGAACTGT GGGGAAAAGT TTTATTTATA GAGATTCATG GGGTAAGTGC
TGTTTTGCAG GTTATCTGAT AAAAGCGAAA ATTGATGAAG AGATAACTCC GGCAGAGTGG
TTTTATTTAA ACACGCTAAC TGACTTTTAT TGGAAGTGGA TTGAAAGTAT TCAAATTCAA
GCTACGATTC AAAACGTCAG TGCAGATAAG TATAACTCGT TCGTTATTGC TGTACCGCCT
CTAGAAGAGA GTTATAAGAT TATTTCTTAT ATCAACTATA ATTTAGAGGT TTTTGATACG
TTAGTAATGA AAGCAGAACA AGCCATCCAA CTGATGCAAG AACGCCGCAC TGCCTTAATT
TCCGCTGCCG TCACGGGAAA AATTGACGTG CGGGGTTGGG TTGCGCCTGA ATAA
|
|---|
| Protein sequence | MAELVTKYQR YAEYKDSGVE WLGKIPSHWE LSKLRYMFSF GRGLTITKAD LLDTGVPCVN
YGEVHSKYGF EVDPKRHYLK CVDEGYLQSS PYALLTQGDL VFADTSEDIE GSGNFTQLVS
DDLIFAGYHT VIARPFDRQC SRFYAYLMDS KEIRTQVRHM VKGVKVFSIT QSILKGVRIW
LPSLDERETI ANFLDFETAQ IDTLIDKQKT LIQLLKEKRQ AVISHAVTKG LNPDAPLKDS
GVEWLGEVPE HWGVSKLKYL ISEPLQYGAN EAAEDVDKTQ PRFVRITDVL PNGNLKDDTF
RSLPQEIAEP YMLMDGDVLL ARSGGTVGKS FIYRDSWGKC CFAGYLIKAK IDEEITPAEW
FYLNTLTDFY WKWIESIQIQ ATIQNVSADK YNSFVIAVPP LEESYKIISY INYNLEVFDT
LVMKAEQAIQ LMQERRTALI SAAVTGKIDV RGWVAPE
|
|---|
| |