Gene Psyc_0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0392 
Symbol 
ID3513996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp490541 
End bp492499 
Gene Length1959 bp 
Protein Length652 aa 
Translation table11 
GC content45% 
IMG OID637669082 
Productnucleotidyltransferase 
Protein accessionYP_263694 
Protein GI71064967 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00832974 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCCATC TTGATTTTAC CCAGCCACCA TTTGACGTTT TAAGCGCCGC TGAACGCCAA 
AGTATCAAAA AAAACACCCA AGTTCGTTAT CTTGCCAAAG ATGAGACATT ATCGACGGAT
GATTTGCAGT ACTTTTATGT GGTACTTAAA GGTCATGTCG AGCAGCTGCT TGACGGTACC
TTTGTCACCT CCTATTTAGG TAGCAACCAT ACCGATCATC TCAATAATAA CGATTGGTTT
GATAGCCGCC GTCTGCCAAA ACCCATGATA GAAGATGGGT TGCAAGAAAG CGATCTTCAA
AAAGATACAG ATATAAACGA ATTAATAATG CCTTATCAAT TTCGTGCGGT CGAAGATACT
TTGCTGCTGC AAGTAAATGG GACAGCCATT GATAAAATCA GTGCGCAAAA CTATTTAGTT
CGTCAATTAG TATCAGAAAA CCTGCCCGAA CGTTTAAAAG CTTTACAGCT ACGGCGTAGT
GGACAGCATT TAGATGCTGC CAGTTATGAC GACCAACAAG AAGTGCAGCA GATTATGCTA
CAGCCAGTAA TTGATATCAC TTTATTGCCC GTACATATCG TTGGCGCAGA TGACAACTTA
TATCAAGCAG CTCGCACCAT GACTGAGGCT GGGCTTAAAC ATGTTTTGGT ACGTCCAACA
GGGTATTTAC AAGATAAAGA TAGCTTTGAT CGTACTTTAG GCATTCTCAC TGATAACGAT
ATCTGCCGTG CTGTGAGCGA TCAAAAAAAT CCTGCTACGA CCCCTTGTCA AGGCTATGCA
AGTTTTCATC TGCGAACCAT CGATGCTGAT GATGATATTG GCGATGCGCT ATTGACGATG
ACGCGCTACC GTATCCATAG GCTGCCAGTG ATAGATGCTA ATGGTAAGGT CATAGGCGTA
CTTGGGCAAA GCGATATGCT CGCTCATATT GGTCATCACT CTCAGCTGAT TAGTATTCAA
ATCGAACAAG CGACAGATTT GCCAAGCTTG GCGACCGCAG TTGAGCTCAT TGGACGCTAT
ATACGCGCTC AATATCAAAA TGGTATCAAA ATGGGCAACG TCAGCCGCAT GGTACAGACC
CTTAACGCGC AAGTATTTAC CAAGCTTTGG CAACTTATCG TCCCTGATGA AGTAATGGAA
AATACCTGTG TCATCGTTAT GGGTTCAGAG GGTCGCGGCG AGCAAATCAT GCGTACTGAC
CAAGACAATG CGCTTATCAT CCGTGATGGT TTTACCCACC CTGAGCTTGC CCGATTTGCC
GAAACCTTTA ACCAGCACTT AGCAAATCTT GGCTATCCGC TGTGTGAAGG TAATATCATG
ATGACCAATC CCATGTGGCG GCAACCCTTA AAGCCGTTTA AAGCACAGAT TAGTGCATGG
TATAAAAATA CCGACCCGAT ACACAGTATT TATTTATCCG CCATATTTGA TGGGGAGTAC
GTCTGCGGTG ATGAATCGCT ACTGATTCAG ATTCGTGAAC ATCTAAAAAC TGCCCATCGG
CAGTCAGACT TGATGTTCGT GCGCCAATTT GCACGAGCAG CGCTACAGTT TGGCGATATC
AATCAATGGT GGCAAAAGCT AGTACCGTTA TTGGGTGGCA AACCTATCTC TTATACTATT
GACCTAAAAA AAGCGGGTAT CTTTCCATTG GTACATGGCA TCCGTACCTT GGCGTTAGAA
AACGATATCT TTACCGACCC TAGCAGCAAA GGTCGCCTCA AAGCTTTGGT TCAAGCTCGG
GCGTTAACCC AAGAGCGTGC CGACACTTTA CTTGAGGCGT TAGAGTTTTT TATGGCACAG
CGCTTATCAG TCGCGCTATC GACAGACAAC AAGCATGCGC AAGAAGTGGA TCCACGGACG
TTGTCGGCAC TAGAGCGTGA TTTATTAAAA GAGTGCCTAG CCGTAGTAAA AAGCTTCAAG
GGACAATTAA GTCGACAGTA TCAGCTTGAG ATTGGTTAG
 
Protein sequence
MPHLDFTQPP FDVLSAAERQ SIKKNTQVRY LAKDETLSTD DLQYFYVVLK GHVEQLLDGT 
FVTSYLGSNH TDHLNNNDWF DSRRLPKPMI EDGLQESDLQ KDTDINELIM PYQFRAVEDT
LLLQVNGTAI DKISAQNYLV RQLVSENLPE RLKALQLRRS GQHLDAASYD DQQEVQQIML
QPVIDITLLP VHIVGADDNL YQAARTMTEA GLKHVLVRPT GYLQDKDSFD RTLGILTDND
ICRAVSDQKN PATTPCQGYA SFHLRTIDAD DDIGDALLTM TRYRIHRLPV IDANGKVIGV
LGQSDMLAHI GHHSQLISIQ IEQATDLPSL ATAVELIGRY IRAQYQNGIK MGNVSRMVQT
LNAQVFTKLW QLIVPDEVME NTCVIVMGSE GRGEQIMRTD QDNALIIRDG FTHPELARFA
ETFNQHLANL GYPLCEGNIM MTNPMWRQPL KPFKAQISAW YKNTDPIHSI YLSAIFDGEY
VCGDESLLIQ IREHLKTAHR QSDLMFVRQF ARAALQFGDI NQWWQKLVPL LGGKPISYTI
DLKKAGIFPL VHGIRTLALE NDIFTDPSSK GRLKALVQAR ALTQERADTL LEALEFFMAQ
RLSVALSTDN KHAQEVDPRT LSALERDLLK ECLAVVKSFK GQLSRQYQLE IG