Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0356 |
Symbol | plsC |
ID | 3514047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 443633 |
End bp | 444433 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637669043 |
Product | lyso-ornithine lipid acyltransferase |
Protein accession | YP_263659 |
Protein GI | 71064932 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAC CCAAATCAGG CTTTTCAATC AAACAGCAAT TGGGGCGCGG CAAACAGATT GCTGGCATGA CCACCACGAT CGCTGGTGGG TTACGCGCCG CCCAACGTAT TGGGGCATTT AAACAGCCGC CACGCGAAAC ACTGCCACGC TATATCCAAG CTTTTTGCCG TAAAATGGCA GGCTCTTTTG GCGTCAAGGT TATTGCTGTT GAGCGAGTAG AGCAACATCA CGGGTTATGG GTCTCTAACC ATGTATCATG GATGGACATC CCTGTGGTCG GTACAGTAAG CCCTGCCTTC TTTTTATCCA AAGCTGAAAT TGGTGAGTGG CCTATCTTTG GTAAACTGGC ACACGCGGCA GGCACGGTAT TTATCGAACG TGGTTCCGGT GATGTAGGCT CAGTCGCCTC GCAAATCGCC AACTTTCTAA CCAAAGGTTT TTCGGTTATC TTTTTTCCTG AAGCGACCAC CACAGATGGC AAAAAAATCA AACGTATTCA TGGCACCTTA CTACAAGCTG CAATAGATGC TGACGTACCT GTGCGCCCGC TGGTGATTGC TTATGTCAAT AAAGATGGCA CGTTAAGTGA AGCATTACCC TATTACGGCA AGCTTACGAT GAAAGACAGC TTAAAGAAGG TATTAGATAG TAAAGATGTC ACCGCTTACG TCTTACCACT AGAAGCTATC GATCCTAAAG GTTTGACCAA AAGTCAGCTG ACGGATTTAT TACAAGCACG TATGCGAGAA GGCTTAGCTG AATTACATTC GCGCGTATTG ACCAAAATAG CGAAAGTTTA A
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Protein sequence | MSQPKSGFSI KQQLGRGKQI AGMTTTIAGG LRAAQRIGAF KQPPRETLPR YIQAFCRKMA GSFGVKVIAV ERVEQHHGLW VSNHVSWMDI PVVGTVSPAF FLSKAEIGEW PIFGKLAHAA GTVFIERGSG DVGSVASQIA NFLTKGFSVI FFPEATTTDG KKIKRIHGTL LQAAIDADVP VRPLVIAYVN KDGTLSEALP YYGKLTMKDS LKKVLDSKDV TAYVLPLEAI DPKGLTKSQL TDLLQARMRE GLAELHSRVL TKIAKV
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