| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0355 |
|---|
| Symbol | hflX |
|---|
| ID | 3514046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 441586 |
|---|
| End bp | 443055 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637669042 |
|---|
| Product | GTP - binding protein, phage lambda cII repressor |
|---|
| Protein accession | YP_263658 |
|---|
| Protein GI | 71064931 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2262] GTPases |
|---|
| TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAATATT TTGAAAGACA TACCGGTGGC GAGCGCGCCA TCATCGTACA TTTAGACATC
CGCCAAATTC AAGATCCTGA TGATCTGGGT GAGTTTGAGC TATTGGCAGA CTCAGCAGGC
GCAGATCGCT TGGCACTGGT CACAGGCTCT CGTGCACGTC CCGATGCCAG ATATTTCGTT
GGTAGCGGCA AAGCAGAAGA GATAGCAGAA TTGGTGCGCG AGCATGATGC GGATATCGTG
CTTTTTAACC ACAGCTTATC GCCTTCACAA GAGCGTAATA TTGAAGCCTT GGTGCAATGC
CGCGTACTTG ATCGTACGGG TCTGATTTTG GACATTTTTG CGCAGCGTGC ACGTACTTAT
GAAGGTAAAC TACAAGTAGA GCTGGCGCAG CTTAATCATT TATCAACGCG TTTAGTTCGT
GGTTGGACGC ATTTGGAACG TCAAAAAGGC GGTATTGGTC TGCGTGGACC CGGTGAAACT
CAGCTTGAGA CGGATCGCCG TTTGCTACAA GTGCGAGTCA TGCAGCTCAA AAGTAGAATT
GAAAAAGTCA GACAGACACG TGCGCAAGGT CGAGCTCGCC GCCAAAAATC AGATGTGCCG
ACTATCTCAC TTGTTGGTTA TACCAATGCT GGCAAGTCCA CTTTATTTAA TCGCTTGGTC
GATGAAAATA TCTATGCGGC CGATAAATTG TTTGCGACGC TCGACCCGAC GCTACGCCGC
CTAGATTGGC AAGGTGTGGG ACGCGTGGTA TTGGTCGATA CCGTAGGTTT TGTCCGTCAC
CTGCCACATG AGTTGGTTGA ATCTTTCCAT GCAACCTTAG AAGAGACGCT TGAGGCAGAC
TTATTGCTAC ATGTCATCGA TTCTTCGAGC GAAGACATGC ATGAGCAAAT TCAAGCGGTG
AAAGATGTAC TTGCTGAAAT TGATAATGAT GTGCCTGTGC TCAATGTTTA TAACAAGATC
GATTTAACCG ATGAGCCTGC ACGTATCGGT TATGCCAGCG AAGGTCAGCC TAATCGCGTC
TATGTTTCTT CTAGAGAAAA CTTAGGCATG GAAGAATTGT CATTAGCCGT GCAGCAGTTA
CTCACTGGCA CACTGACTAC CTTTGATTTG ACACTGCCCT ATAATGCTGG GCAGTTAAAA
AATGCCTTGT ATGAGCTGGG TGTTATCCAA GAAGAAAGCT ATGATGACAG TGGTCATGAG
TGCTTAACGA TTCGCTTGCC AAGCGATAGA CTGAGACAGT TACTTGGTCA AGCCAACTTA
GAGCCTTTAG ATGTATTGCC ATTAGCGCAA GCGACATTGC TGATGCCGAT ACTTGAAGAG
TTTGAAAAAC CTGATGAAGA TGAAGAACAA ACGATGACGG ACGCTGAAGA AAAAGCGTTT
GCTGAATTTG AGGCGTTAAA TGCTGAAGCT GAAAGAGCAG CACAAGACTT GATAACAGAA
GACATTCAAA CACCTGACTC GCAAAAATAA
|
|---|
| Protein sequence | MEYFERHTGG ERAIIVHLDI RQIQDPDDLG EFELLADSAG ADRLALVTGS RARPDARYFV
GSGKAEEIAE LVREHDADIV LFNHSLSPSQ ERNIEALVQC RVLDRTGLIL DIFAQRARTY
EGKLQVELAQ LNHLSTRLVR GWTHLERQKG GIGLRGPGET QLETDRRLLQ VRVMQLKSRI
EKVRQTRAQG RARRQKSDVP TISLVGYTNA GKSTLFNRLV DENIYAADKL FATLDPTLRR
LDWQGVGRVV LVDTVGFVRH LPHELVESFH ATLEETLEAD LLLHVIDSSS EDMHEQIQAV
KDVLAEIDND VPVLNVYNKI DLTDEPARIG YASEGQPNRV YVSSRENLGM EELSLAVQQL
LTGTLTTFDL TLPYNAGQLK NALYELGVIQ EESYDDSGHE CLTIRLPSDR LRQLLGQANL
EPLDVLPLAQ ATLLMPILEE FEKPDEDEEQ TMTDAEEKAF AEFEALNAEA ERAAQDLITE
DIQTPDSQK
|
|---|
| |