Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0343 |
Symbol | relA |
ID | 3515060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 423686 |
End bp | 426226 |
Gene Length | 2541 bp |
Protein Length | 846 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637669030 |
Product | putative RelA/SpoT family protein |
Protein accession | YP_263646 |
Protein GI | 71064919 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000094604 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAAAAA TTCGTGAAGG ATTACCGCTG GTAGATGGAC AAACCACGCA AGCCGACAGC GCAACTTTGG CAGCGCAACT GGTCGCGAAT CAACGCTCGC ATCAGTCTGC CAATAGCTAT GCTCAAATCC CACTAGATAT CAAGTATCAA CTTGCCACTC GTAAACTCCA TACCACCTTT GATCGCTCTG TCAATTACGC ATATTACAGT CATGACTCAA ATCTTGAAAA TGACTATTTA AGGGATAAAA TCCTTGATGA ATCCGAGGCG TTTTCACAAC AAGAGCTTGA AGCGTTAGAT TTGGATCACA TCAATATTGA CGTACCCACT TGGCTTGACA ATGTTGCCAA GCGTATTGGG CAAGATTCGG TACCCAATCT TAGCGCTGCC TGTGCGTTTA TACGTAAGCA CATGAATACC AGTGCATCGG AGCGTTCGGG CGCTTACGTG ACTGGTATTG GCATGACTGA TATCTTAACC TATCTCTATC AAGATGAAGA TGCCCTTGTC GCTGCCATGC TCTATCGCAG TGCGCGCCAA TCGATTATTA GTCTTAACGA TATTGAAAAA AAGTTTGGCG CGGATATTTC AACCTTGGTT AAAGATACTT TGGCGATGGG TCAATTGTCT GAGATTATTG AAAGTAATAA GCGCTTAGAA GATCACTTTG TAAATAACCA ACGTGACCAG CTATCAAATA TTTATAGTAT GCTGATCTCA GTCACCAACG ATGTCCGGGT GGTACTGATT AAGCTTTCTG AACGTACTTT TGCTATGCGC GAGCTGACCT TTTCTAATGA AGATCGGCAA ACTCGTGTGG CGCGTGAGGT TATGACCATT TACGCGCCGT TGGCACATCG CTTGGGTATT GCCCAGCTTA AATGGGAGCT TGAAGATTTA GCGTTTCGTT ACCTTGCCCC TGACCGTTAT AAAGAGATTG CCAAGCTGTT GTCAGAAAAG CGTAGCGAGC GTGAATCCTA TATTCAGCGC GTACAAGATA GGCTCAATGA GTCTTTGGCA GAATCGGGTA TTGAGGGCGA AGTTTCAGGA CGTGTTAAGC ACATTTATTC TATTTATCGA AAAATGAAGC TCAAAGGTTT ATCCTTTGAT CAGCTGTACG ATATCCGTGC GCTGCGCGTT TTAGTGACCA CTCCTTCAGA CTGTTATCAT GTCCTTGGGC TGGTACACGG GTTGTGGCGT TATATTCCTG AACAATTTGA CGATTATATT ACCAATCCAA AGTCTAATGG TTATCGTTCA CTCCATACTG CAGTCATCGC TGAAAACAAA TCGCTTGAGG TGCAGATTCG TACTCAAGAG ATGCATTTTG AAGCCGAGCT TGGCATGTGT GCCCATGTCA ATTACAAAGA AGGTCTAAAA AATAAGAAGG ATAACTACCT TAACCAGCGA ATCAGTTCAT TACGTCAACT ACTGTCTATC AATAATCAGC CGCGCTCATC CTTATCGACT GGTGACGAGT TAGAAGAAAC TGAGTTTGAT GATGAAGAGC AGTTGGTTGA TTTTGATGAG CTCGAACGTA TTTACATCTT TAGTCGTGAT GGTGATATTA CTGAGTTGCC AAAAGGCGCG ACTGTGTTAG ATTTTGCCTA TTATGTCCAT ACGCAAGTCG GTAACCGCGC CCAAGCAGCA CGGGTTAATC AGCGTTATGT GCCGCTGACC TATCAGCTCA AAACGGGCGA GCAAGTCGAG ATTATTACCA AATCTTCACG TGAGCCCAAT CGCGATTGGC TGGTGGCTTC ACTGGGCTAT ATCCATACCA ACCGTGCCCG CTCAAAACTT CGTCAATGGT TTAATAAACA AGACCGCGAT AAGAATATCG AGATCGGTCG TCAGATGCTA AGTAAAGAGC TTGAACGCCT ATCGGTGCAC CCAAATAGCA TTGATTTAAA CGATTATACG CAGCATTTTA ATGTTAATAA TACTGACGAT ATCGTGGTCG GTCTGGTAAC GGGTGAAATT GGTCTAAATC AGCTCACCAG CCATATTTCT CGTCAATTGC ATCTAGAGCC TGAAAGATCT GAAGAAGATT TTGCCCCTAC TATTGATAAA AGAGAATCAG GCAAGCTTGA TGCTTATAAA ATTCAAATCG ATGGCTTAGA TAATATTGAG GTTGGTTTGG CAGGCTGCTG TCATCCTGTA CACGGTGAGC CTATTGCAGG TTACATTACT TTATCGCGCG GTGTCAGTGT TCATAACCGT GGTTGTCCTG AATATCTGCG CTTGATTGAA CGTGACCCTG AACGCGAAAT TAAGGCAGCT TGGAAGATTA AATCAGGTCG CTATCAGCCG GTTGATATTC ATATAGAAGC GTATGACAGA CGCGGGTTAT TGCGTGACTT AACCCAAATT ATTGATAAAG AGAACGTCAA TATTCGTCAA GTTCAAACAC TCAGTAACGA TGATAATATT GCCTTTTTAA AGTTTCATAT TGAGGTGTCG GGGCTGGCGC ATTTATCCAA GTTACTTGCC AAGCTTGAAC AGCAACACGG TATCTTGCAT GCGCGGCGCG CGGTTGCTTA A
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Protein sequence | MVKIREGLPL VDGQTTQADS ATLAAQLVAN QRSHQSANSY AQIPLDIKYQ LATRKLHTTF DRSVNYAYYS HDSNLENDYL RDKILDESEA FSQQELEALD LDHINIDVPT WLDNVAKRIG QDSVPNLSAA CAFIRKHMNT SASERSGAYV TGIGMTDILT YLYQDEDALV AAMLYRSARQ SIISLNDIEK KFGADISTLV KDTLAMGQLS EIIESNKRLE DHFVNNQRDQ LSNIYSMLIS VTNDVRVVLI KLSERTFAMR ELTFSNEDRQ TRVAREVMTI YAPLAHRLGI AQLKWELEDL AFRYLAPDRY KEIAKLLSEK RSERESYIQR VQDRLNESLA ESGIEGEVSG RVKHIYSIYR KMKLKGLSFD QLYDIRALRV LVTTPSDCYH VLGLVHGLWR YIPEQFDDYI TNPKSNGYRS LHTAVIAENK SLEVQIRTQE MHFEAELGMC AHVNYKEGLK NKKDNYLNQR ISSLRQLLSI NNQPRSSLST GDELEETEFD DEEQLVDFDE LERIYIFSRD GDITELPKGA TVLDFAYYVH TQVGNRAQAA RVNQRYVPLT YQLKTGEQVE IITKSSREPN RDWLVASLGY IHTNRARSKL RQWFNKQDRD KNIEIGRQML SKELERLSVH PNSIDLNDYT QHFNVNNTDD IVVGLVTGEI GLNQLTSHIS RQLHLEPERS EEDFAPTIDK RESGKLDAYK IQIDGLDNIE VGLAGCCHPV HGEPIAGYIT LSRGVSVHNR GCPEYLRLIE RDPEREIKAA WKIKSGRYQP VDIHIEAYDR RGLLRDLTQI IDKENVNIRQ VQTLSNDDNI AFLKFHIEVS GLAHLSKLLA KLEQQHGILH ARRAVA
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