| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0340 |
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| Symbol | mscL |
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| ID | 3515057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 421373 |
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| End bp | 421810 |
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| Gene Length | 438 bp |
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| Protein Length | 145 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637669027 |
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| Product | large-conductance mechanosensitive channel |
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| Protein accession | YP_263643 |
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| Protein GI | 71064916 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1970] Large-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.137149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTATGG TATCTGAGTT TAAAAAATTT GCTTTAAAAG GCAATGTGAT GGATCTCGCC
GTCGGTGTGA TTATCGGTGG AGCGTTCGCT ACGATCACAA AGTCTTTAGT AGAGGACGTT
ATCATGCCCA TCGTTGCTTT TATTGCCGGC GGTGAAATTA ATTTTAAAAA TATGTTTTTG
ATACTAGGTG ATACACCTGA AGGTGTAGTA ATGACTTATG ATGCTCTCAA AGCCGCTGGC
GTTCCTGTAT TGGCTTATGG TAATTTTATT ACGGTATTGA TTAACTTTTT AATTCTGGCA
TTTATTATCT TTATGATGGT AAAAATGGTC AATAGATTGC GCCGTGCAGA TGAGGTTGTA
GAGAAAATCG CAGGACCTTC TGAAGAAGTG CAATTGCTGC GCGAAATTAG CGCTAAGCTT
GGTAATATTA ATAAGTAA
|
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| Protein sequence | MSMVSEFKKF ALKGNVMDLA VGVIIGGAFA TITKSLVEDV IMPIVAFIAG GEINFKNMFL
ILGDTPEGVV MTYDALKAAG VPVLAYGNFI TVLINFLILA FIIFMMVKMV NRLRRADEVV
EKIAGPSEEV QLLREISAKL GNINK
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