| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0336 |
|---|
| Symbol | pdxJ |
|---|
| ID | 3515053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 415584 |
|---|
| End bp | 416378 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637669023 |
|---|
| Product | pyridoxine 5'-phosphate synthase |
|---|
| Protein accession | YP_263639 |
|---|
| Protein GI | 71064912 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.305659 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCTA CAGCGCAGAT TTTGCCGAAT ACATTAGAGC AAAATTCAGA TAATATATCA
AAAAAACCAC TCTTAGGTGT CAACGTTGAC CATGTGGCAA CCTTACGTCA AGCACGCGGT
GTGAGCTATC CAAGCCCACT AGCTGCAGCC CTTTTGTGTG AGAAAGCAGG TGCTGATGGT
ATCACCATTC ATTTGCGTGA AGATCGCCGT CATATTCAAG ATGCCGATGT GTATGAGATG
GCAGGGCAGC TGACCACTAG AATGAATCTA GAGATGGCAG CAACGACTGA GATGCTAGAG
ATAGCCTGCC GAGTCAAACC ATATTGGGTA TGTTTAGTGC CAGAAAAGCG TGCTGAATTA
ACCACAGAGG GCGGGCTTGA TGTAGCAGGA CAGCTGGATT TGTTGAAAGA TTATGTCGCT
AAATTACAGG CAGCAGGTAT TAAAGTCTCT CTATTTATTG ATCCCGAAGA CAAGCAGATT
AATGCAGCAG TCACTTGTGG CGCTGATGCT ATTGAATTAC ATACAGGTTC TTACGCTGAG
GCAGGTTTGG CAGGTGATAT AGAGAAAGGA AGTGTAGAGC TTGAACGTAT TAAAACTGCA
GTGATTACCG CCAAACGAAT TGATAGTAAG CTGTTGGTCA ATGCTGGTCA CGGTCTTACA
CATGATAATG TTAATGCGAT TGCCCAAATT GACGGTATAT ATGAGCTAAA TATTGGTCAT
GCCTTGATAG CGGATGCGCT ATTTGTGGGG ATAGAGCAGG CTGTTATTAT GATGAAAATA
GCTATGCATC GCTAG
|
|---|
| Protein sequence | MTATAQILPN TLEQNSDNIS KKPLLGVNVD HVATLRQARG VSYPSPLAAA LLCEKAGADG
ITIHLREDRR HIQDADVYEM AGQLTTRMNL EMAATTEMLE IACRVKPYWV CLVPEKRAEL
TTEGGLDVAG QLDLLKDYVA KLQAAGIKVS LFIDPEDKQI NAAVTCGADA IELHTGSYAE
AGLAGDIEKG SVELERIKTA VITAKRIDSK LLVNAGHGLT HDNVNAIAQI DGIYELNIGH
ALIADALFVG IEQAVIMMKI AMHR
|
|---|
| |