Gene Psyc_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0330 
SymbollepA 
ID3515047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp409080 
End bp410876 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content45% 
IMG OID637669017 
ProductGTP-binding protein LepA 
Protein accessionYP_263633 
Protein GI71064906 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0481] Membrane GTPase LepA 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGCAT TAGCCAATAT TCGTAACTTT TCTATTATTG CCCACATTGA TCATGGCAAA 
TCGACGCTTG CCGATCGCTT TATTCAGATG TGTGGCGCGC TGCAAGATCG CGAGATGCAG
GCACAAGTCC TTGATTCTAT GGATATTGAG CGTGAGCGCG GTATCACGAT TAAAGCGCAG
TCGGTGACGC TGTATTATGA CCATCCCAAT GGTGAGCGTT ATCAGCTGAA TTTTATTGAT
ACCCCGGGCC ACGTGGATTT CTCTTATGAG GTCTCACGCT CCTTAGCGGC TTGTGAAGGC
GCTTTATTGG TGGTTGATGC CGCACAAGGC GTGGAAGCGC AGTCTGTTGC CAATTGTTAT
ACCGCTGTTG ATCAAGGCTT AGAGGTCATG GCAGTTTTAA ATAAAATTGA CTTGCCACAA
GTTGAGCCTG AACGTGTTAT TCAAGAGATT GAAGACATCA TTGGTATTGA TGCCGTTGAT
GCGCCACGCG TGTCAGCAAA ATCCGGTCTT GGCGTTGATA AGTTGCTTGA GGCGTTGGTT
GAGTTTATTC CTGCGCCAAC AGGTGATCGT GACGCACCGC TGCAAGCGTT AATTATTGAT
TCATGGTTTG ATAATTATTT AGGCGTCGTA TCATTAGTGC GTGTACGCCA AGGTACGATA
AAAAAAGGCG ATAAACTTTA TATTAAATCG ACCAAAGATG CGCATCTAGT CGGATCAATT
GGTGTCTTTA CTCCGAAGCC GTTAGATACG GGTATCTTAG AAGCGGGTGA AGTAGGCTTT
ATTATTGCAG GTATTAAAGA TATTGCTGGT GCGCCGGTTG GTGATACGAT TACTCATGCC
AGTACGCCTG ATGTCGATTG TATTCCTGGA TTTAAACAGA TTACGCCGCA AGTATATGCC
GGTATGTTCC CTGTTGAATC TACTGATTTT GAAAAATTCC GTGAAGCGCT GCAAAAATTG
CAAATCAACG ATGCGTCGCT ATTTTTTGAG CCAGATACTT CTGATGCGTT AGGCTTTGGT
TTCCGCTGTG GCTTCCTCGG TATGCTGCAC ATGGAGATTA TCCAAGAGCG TCTAGAGCGT
GAGTATGACT TGGATTTGAT TACCACCGCT CCGTCAGTTA TCTACGAGAT TGTGAAAAAA
GATGGCAGTA TTATCTATGT TGATAACCCA TCAAGATTGC CTGAACCGAA TAATATAGAA
GAGTTCCGTG AGCCTATTGC TCGCTGTCAG ATTTTAGTAC CGCAGGATTA TCTGGGTAAT
GTGATGACGC TTTGTATTGA GCGCCGTGGT GTGCAGGTCG ATATGCGTTT TATGGGTCGC
CAAGTGCAAT TGATCTTTGA TATTCCGATG GGTGAAGTGG TGATGGACTT CTTTGACCGT
CTAAAATCGG TATCACGTGG CTTTGCGTCA CTTGATTATA ATTTTGAGCG TTATCAGGTC
GATAAATTGG TTAAGGTTGA CGTCTTGATT AATGGTGATA AAGTCGATGC ACTCGCTATG
ATTGTTCATG AAACCCAGTC GCGCTACCGT GGTAATGCGC TGGTTAGTAA GATGAAAGAG
CTGATTCCGC GTCAGATGTT TGATGTCGCT ATCCAAGCAG CGATTGGCAG CCAAATCATT
GGTCGTAGTA CGGTAAAAGC CATGCGTAAA GATGTCCTAG CTAAGTGTTA TGGCGGTGAC
GTCTCGCGTA AGAAAAAGCT ACTCTCGAAA CAGAAAGCTG GTAAAAAGCG CATGAAGCAG
GTGGGTAACG TGGAGATTCC ACAGGAAGCC TTCCTAGCGG TATTGCAGGT AGACTAG
 
Protein sequence
MTALANIRNF SIIAHIDHGK STLADRFIQM CGALQDREMQ AQVLDSMDIE RERGITIKAQ 
SVTLYYDHPN GERYQLNFID TPGHVDFSYE VSRSLAACEG ALLVVDAAQG VEAQSVANCY
TAVDQGLEVM AVLNKIDLPQ VEPERVIQEI EDIIGIDAVD APRVSAKSGL GVDKLLEALV
EFIPAPTGDR DAPLQALIID SWFDNYLGVV SLVRVRQGTI KKGDKLYIKS TKDAHLVGSI
GVFTPKPLDT GILEAGEVGF IIAGIKDIAG APVGDTITHA STPDVDCIPG FKQITPQVYA
GMFPVESTDF EKFREALQKL QINDASLFFE PDTSDALGFG FRCGFLGMLH MEIIQERLER
EYDLDLITTA PSVIYEIVKK DGSIIYVDNP SRLPEPNNIE EFREPIARCQ ILVPQDYLGN
VMTLCIERRG VQVDMRFMGR QVQLIFDIPM GEVVMDFFDR LKSVSRGFAS LDYNFERYQV
DKLVKVDVLI NGDKVDALAM IVHETQSRYR GNALVSKMKE LIPRQMFDVA IQAAIGSQII
GRSTVKAMRK DVLAKCYGGD VSRKKKLLSK QKAGKKRMKQ VGNVEIPQEA FLAVLQVD