Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0330 |
Symbol | lepA |
ID | 3515047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 409080 |
End bp | 410876 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637669017 |
Product | GTP-binding protein LepA |
Protein accession | YP_263633 |
Protein GI | 71064906 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0481] Membrane GTPase LepA |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01393] GTP-binding protein LepA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACTGCAT TAGCCAATAT TCGTAACTTT TCTATTATTG CCCACATTGA TCATGGCAAA TCGACGCTTG CCGATCGCTT TATTCAGATG TGTGGCGCGC TGCAAGATCG CGAGATGCAG GCACAAGTCC TTGATTCTAT GGATATTGAG CGTGAGCGCG GTATCACGAT TAAAGCGCAG TCGGTGACGC TGTATTATGA CCATCCCAAT GGTGAGCGTT ATCAGCTGAA TTTTATTGAT ACCCCGGGCC ACGTGGATTT CTCTTATGAG GTCTCACGCT CCTTAGCGGC TTGTGAAGGC GCTTTATTGG TGGTTGATGC CGCACAAGGC GTGGAAGCGC AGTCTGTTGC CAATTGTTAT ACCGCTGTTG ATCAAGGCTT AGAGGTCATG GCAGTTTTAA ATAAAATTGA CTTGCCACAA GTTGAGCCTG AACGTGTTAT TCAAGAGATT GAAGACATCA TTGGTATTGA TGCCGTTGAT GCGCCACGCG TGTCAGCAAA ATCCGGTCTT GGCGTTGATA AGTTGCTTGA GGCGTTGGTT GAGTTTATTC CTGCGCCAAC AGGTGATCGT GACGCACCGC TGCAAGCGTT AATTATTGAT TCATGGTTTG ATAATTATTT AGGCGTCGTA TCATTAGTGC GTGTACGCCA AGGTACGATA AAAAAAGGCG ATAAACTTTA TATTAAATCG ACCAAAGATG CGCATCTAGT CGGATCAATT GGTGTCTTTA CTCCGAAGCC GTTAGATACG GGTATCTTAG AAGCGGGTGA AGTAGGCTTT ATTATTGCAG GTATTAAAGA TATTGCTGGT GCGCCGGTTG GTGATACGAT TACTCATGCC AGTACGCCTG ATGTCGATTG TATTCCTGGA TTTAAACAGA TTACGCCGCA AGTATATGCC GGTATGTTCC CTGTTGAATC TACTGATTTT GAAAAATTCC GTGAAGCGCT GCAAAAATTG CAAATCAACG ATGCGTCGCT ATTTTTTGAG CCAGATACTT CTGATGCGTT AGGCTTTGGT TTCCGCTGTG GCTTCCTCGG TATGCTGCAC ATGGAGATTA TCCAAGAGCG TCTAGAGCGT GAGTATGACT TGGATTTGAT TACCACCGCT CCGTCAGTTA TCTACGAGAT TGTGAAAAAA GATGGCAGTA TTATCTATGT TGATAACCCA TCAAGATTGC CTGAACCGAA TAATATAGAA GAGTTCCGTG AGCCTATTGC TCGCTGTCAG ATTTTAGTAC CGCAGGATTA TCTGGGTAAT GTGATGACGC TTTGTATTGA GCGCCGTGGT GTGCAGGTCG ATATGCGTTT TATGGGTCGC CAAGTGCAAT TGATCTTTGA TATTCCGATG GGTGAAGTGG TGATGGACTT CTTTGACCGT CTAAAATCGG TATCACGTGG CTTTGCGTCA CTTGATTATA ATTTTGAGCG TTATCAGGTC GATAAATTGG TTAAGGTTGA CGTCTTGATT AATGGTGATA AAGTCGATGC ACTCGCTATG ATTGTTCATG AAACCCAGTC GCGCTACCGT GGTAATGCGC TGGTTAGTAA GATGAAAGAG CTGATTCCGC GTCAGATGTT TGATGTCGCT ATCCAAGCAG CGATTGGCAG CCAAATCATT GGTCGTAGTA CGGTAAAAGC CATGCGTAAA GATGTCCTAG CTAAGTGTTA TGGCGGTGAC GTCTCGCGTA AGAAAAAGCT ACTCTCGAAA CAGAAAGCTG GTAAAAAGCG CATGAAGCAG GTGGGTAACG TGGAGATTCC ACAGGAAGCC TTCCTAGCGG TATTGCAGGT AGACTAG
|
Protein sequence | MTALANIRNF SIIAHIDHGK STLADRFIQM CGALQDREMQ AQVLDSMDIE RERGITIKAQ SVTLYYDHPN GERYQLNFID TPGHVDFSYE VSRSLAACEG ALLVVDAAQG VEAQSVANCY TAVDQGLEVM AVLNKIDLPQ VEPERVIQEI EDIIGIDAVD APRVSAKSGL GVDKLLEALV EFIPAPTGDR DAPLQALIID SWFDNYLGVV SLVRVRQGTI KKGDKLYIKS TKDAHLVGSI GVFTPKPLDT GILEAGEVGF IIAGIKDIAG APVGDTITHA STPDVDCIPG FKQITPQVYA GMFPVESTDF EKFREALQKL QINDASLFFE PDTSDALGFG FRCGFLGMLH MEIIQERLER EYDLDLITTA PSVIYEIVKK DGSIIYVDNP SRLPEPNNIE EFREPIARCQ ILVPQDYLGN VMTLCIERRG VQVDMRFMGR QVQLIFDIPM GEVVMDFFDR LKSVSRGFAS LDYNFERYQV DKLVKVDVLI NGDKVDALAM IVHETQSRYR GNALVSKMKE LIPRQMFDVA IQAAIGSQII GRSTVKAMRK DVLAKCYGGD VSRKKKLLSK QKAGKKRMKQ VGNVEIPQEA FLAVLQVD
|
| |