| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0320 |
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| Symbol | lig |
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| ID | 3514550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 396012 |
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| End bp | 398087 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637669006 |
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| Product | NAD dependent DNA ligase |
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| Protein accession | YP_263623 |
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| Protein GI | 71064896 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.250656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATG CTATCTCACC GCTTACCTCT AAAGACATCG ATACTGCAAA ACCTATTACC
AATGATGATG CTATCGTCAC TCAGATGCGT ACGTTTATCG ATACACTTAA GCAGCATAAT
TATGCCTATT ATGTGCTCGA TAATCCTATC TTAGAAGACA GCGAATACGA TCAATTACGT
CGCTCTTTAC TTGAGCTTGA AGAAGAATAT CCAGACTTGG TACAGCCTGA CAGCCCTATC
AATCAAGTCG GTGATATGCC GTTGCCTGCT TTTACTCAAG TGACCCACGA CATCCCGATG
CTATCGCTTG GGAACGTCTT TGAATATAAT GATTTGCGTG ATTTTATGCG CCGCGTTAAT
GATCGCTTAA GCGTGGCTCA GCAAAGCCCA GAATATGAGA TGGAGCTAAA GCTGGATGGT
TTGGCGGTAT CACTCAAGTA TGTCCACGGT AAATTTACGC AAGCGGTTAC GCGCGGTGAT
GGTCAAACGG GCGAGGATAT CACCCAAAAT GCCAAAACCA TTCGCAATAT GCCGCTTTGG
CTCGCTGATG CCGCTGACAT CGAACTGTTA GAGGTGCGCG GTGAAGTACT GATGCCCAAG
GCAGGTTTTG AGCGTCTAAA TCGCCTAGCG GCAGAAAAAG AGGAAAAAAC TTTTGCCAAT
CCACGCAATG CTGCCGCTGG GAGCTTACGT CAGCTTGATC CAAGTGTAGC CGCCAGTCGT
CCGTTGGCGT TTTACGCCTA TTCAGTCAAT CAAGGATTGC TTGACACTAT CGATACTCAG
TCAGCAGCGC TCGCATGGAT AAAAGATATT GGCTTTAGCG TCAGTGCAGT CGAAGTGGTA
TCAAACCCAC GCGAGGCTCA AACCTATTAT GAGTCAATCA TTGCAACGCG TGCAGATTTG
CCGTTTGAGA TTGATGGCAT GGTCATTAAG GTCAATAGCC TTGCATTACA GCAGCAGCTT
GGCTTTCTAT CACGTGAGCC GCGCTGGGCA ACCGCTTATA AATTCCCTGC CGAAACCGTC
ATGACGCGCT TGCATGCTAT CGACTGGCAA GTCGGACGTA CTGGGCAAAT CACCCCAGTT
GGCAAGCTTG AGCCAGTGAA AGTCGGTGGC GTTACCGTCA GCAATGTTAC CTTGCATAAC
TTCGGTGAGA TTCAGCGATT GGACGTACGT GCAGGCGATA TGGTCAGCGT CCATCGTGCA
GGTGATGTCA TCCCTAAAGT GACCCGTGTC TGGCATGAGC AACGTCCAGA AAATTCTGAA
CCGGTACAGC TGCCGTCGAC CTGTCCGGTG TGCGACTCTC CTGTGGTATT GCCCAAAGAT
GAAGCATTGG CACGTTGTAC CGGCGGACTG TTTTGTCCCG CGCAGCAGCA AGAAGCGCTC
ATTCACTTTG TCTCACGTCG AGCGATGGAT ATCGATGGGC TTGGTGCGAG CTGGCTCATT
AGCTTCTTTG AGCATGGTTT GGTCAAGACG GTCGCTGATA TTTATCAGTT GCACAATCAT
CAAGAAGAAC TGGTTACGCT TGAAAAACTA GGCGAAAAGT CGGTGCAAAA TATCATCAGC
GCCATTGAAG CCAGTAAACA TACTACGCTA TCACGTTTTA TCTATGCGCT GGGTATTCGC
GGTGTCGGTG AGACGACGGC GCAAAACCTC GCCCAGCAAT TTGGCGACCT TGATGCCTTA
ATGTCTGCCA GTATCGAAAA ACTGCTACTC ACGCCAGATG TGGGCGCTAT TACTGCTGAA
CTTGCCTATA AATTCTTCCG CGCACCGCAC AATATCGAAG TCATCACTGC ACTGCGCGAA
GCTGGCGTGC ATTGGGATAA GGTCGAGCAA GTGGTATCAG AGGGCTTGCC GCTCGATGGG
CAAACGTGGG TTATAACCGG CGCACTTGAT AGCATGGCAC GCGATGAAGC CAAAGCAAAA
CTACAAGCGC TCGGTGCCAA AGTCTCCGGT AGCATCTCGG CAAAAACCAC TGCGCTACTA
GCAGGTGATA AGGCTGGCTC AAAAATGGCG AAAGCGGAGA AATTGGGTGT GAAGGTGGTG
GGTGAGGAAG AGTTTTTGGC GTTGGTTGGG GAGTAG
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| Protein sequence | MTDAISPLTS KDIDTAKPIT NDDAIVTQMR TFIDTLKQHN YAYYVLDNPI LEDSEYDQLR
RSLLELEEEY PDLVQPDSPI NQVGDMPLPA FTQVTHDIPM LSLGNVFEYN DLRDFMRRVN
DRLSVAQQSP EYEMELKLDG LAVSLKYVHG KFTQAVTRGD GQTGEDITQN AKTIRNMPLW
LADAADIELL EVRGEVLMPK AGFERLNRLA AEKEEKTFAN PRNAAAGSLR QLDPSVAASR
PLAFYAYSVN QGLLDTIDTQ SAALAWIKDI GFSVSAVEVV SNPREAQTYY ESIIATRADL
PFEIDGMVIK VNSLALQQQL GFLSREPRWA TAYKFPAETV MTRLHAIDWQ VGRTGQITPV
GKLEPVKVGG VTVSNVTLHN FGEIQRLDVR AGDMVSVHRA GDVIPKVTRV WHEQRPENSE
PVQLPSTCPV CDSPVVLPKD EALARCTGGL FCPAQQQEAL IHFVSRRAMD IDGLGASWLI
SFFEHGLVKT VADIYQLHNH QEELVTLEKL GEKSVQNIIS AIEASKHTTL SRFIYALGIR
GVGETTAQNL AQQFGDLDAL MSASIEKLLL TPDVGAITAE LAYKFFRAPH NIEVITALRE
AGVHWDKVEQ VVSEGLPLDG QTWVITGALD SMARDEAKAK LQALGAKVSG SISAKTTALL
AGDKAGSKMA KAEKLGVKVV GEEEFLALVG E
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