| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0309 |
|---|
| Symbol | |
|---|
| ID | 3515113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 379861 |
|---|
| End bp | 381471 |
|---|
| Gene Length | 1611 bp |
|---|
| Protein Length | 536 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637668996 |
|---|
| Product | putative acyl-CoA carboxylase (beta subunit) protein |
|---|
| Protein accession | YP_263613 |
|---|
| Protein GI | 71064886 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.155746 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCTA TCATAACCAG TAAACTGAGT CCAAATGCCG CTGAATTTCA GCAAAACAGT
GCTGCCATGC AAGAGGTGGT TGATGACTTA TATCAGCACC TGCGTAAAGT CGTCCAAGGC
GGCTCAGAGC GTGCGCGAGC CAAGCATCTG GCACGTGGCA AGCTCTTGCC TCGCGAGCGT
GTAGAGCGTT TGCTTGATGT CGGTACACCA TTTTTAGAGG TGGCTCCGAT GGCGGCGCAC
GATATGTATG GCGAAGATAT TCCAGCGGCG GGTGTGATTG CTGGTATCGG TCGTATCAAT
GGTACTGAGT GTATGATTGT CTGTAATGAT GCCACGGTAA AAGGCGGCAC GTATTACCCA
ATAACGGTCA AAAAACATTT GCGTGCGCAG GAAATTGCGC AAGAAAACCA TTTACCCTGT
ATTTACTTGG TCGATTCGGG CGGTGCAAAC TTGCCCAATC AGGATGAAGT ATTCCCAGAT
AAAGAGCATT TCGGGCGTAT CTTCTTTAAC CAAGCCAATC TCAGTGCGGC CGGTATTCCA
CAGATTGCGG TGGTTATGGG CAGCTGTACC GCAGGCGGTG CATACGTGCC AGCGATGAGT
GATGAATCTA TTATTGTTAA AGACCAAGGG ACTATCTTTT TGGGTGGTCC GCCACTGGTC
AAAGCCGCAA CAGGTGAAGA AGTCACGGCA GAAGATTTGG GCGGCGGTGA TGTGCATACG
CGTCTGTCAG GGGTGGTTGA TCATTTGGCG CAAAATGATA CTCATGCGTT ATCGATTGCC
CGTAATATCG TCAGTCATTT GAACCGTCCT GCTAAGCAAA TTCCAAATCA AATAAAACCA
CGTCCACCGC GCTATGATGC TAAAGAGCTA TATGGCGTCA TTCCTACCGA TAAGCGCAAG
CCATTTGATA TCAGAGAGAT TATCACTCGT ATCGTTGATG ACAGTGCCTT TGATGAATTT
AAAGTGCGCT TTGGCACGAC GCTAGTGTGT GGTTTCGCTC ATATCGAAGG CATGCCAGTC
GGTATTATCG CCAATAACGG CATCTTATTT AGTGAGTCTG CACAAAAAGG CACGCACTTT
ATTGAGCTGT GCTGTAAGCG TAAAATTCCT TTGATATTCC TCCAAAACAT CACCGGCTTT
ATGGTTGGTC GTAAGTATGA AAATGAAGGT ATTGCCCGTC ATGGCGCTAA GATGGTGATG
GCAGTAGCCA ACGCCAAAGT ACCTAAGTTT ACTGTCATCG TCGGTGGCTC ATTCGGTGCT
GGTAACTATG GCATGTGTGG ACGTGCTTAT AGCCCGCGCT TCTTATGGAT GTGGCCAAAT
GCGCGCATTT CTGTGATGGG CGGCGAGCAA GCAGCCTCGG TATTGGCAAC CGTCAAGCGC
GATAACTTTG ACCGTAAAGG CGAAGCGTGG AGTGATGAAG ACGAAGCGGC ATTTAAAGCG
CCGATTCGTG AGATGTACGA AAAGCAAGGT CATCCTTATT ATGCCACCGC TCGTCTATGG
GATGACGGCG TGATTGACCC TGCTGATACC CGTAACGTGT TGGCATTAGC GCTTAGCGCA
GCTCACAATG CGCCGATTGA AGAGACAACT TTTGGTGTCT TTAGAATGTA A
|
|---|
| Protein sequence | MSAIITSKLS PNAAEFQQNS AAMQEVVDDL YQHLRKVVQG GSERARAKHL ARGKLLPRER
VERLLDVGTP FLEVAPMAAH DMYGEDIPAA GVIAGIGRIN GTECMIVCND ATVKGGTYYP
ITVKKHLRAQ EIAQENHLPC IYLVDSGGAN LPNQDEVFPD KEHFGRIFFN QANLSAAGIP
QIAVVMGSCT AGGAYVPAMS DESIIVKDQG TIFLGGPPLV KAATGEEVTA EDLGGGDVHT
RLSGVVDHLA QNDTHALSIA RNIVSHLNRP AKQIPNQIKP RPPRYDAKEL YGVIPTDKRK
PFDIREIITR IVDDSAFDEF KVRFGTTLVC GFAHIEGMPV GIIANNGILF SESAQKGTHF
IELCCKRKIP LIFLQNITGF MVGRKYENEG IARHGAKMVM AVANAKVPKF TVIVGGSFGA
GNYGMCGRAY SPRFLWMWPN ARISVMGGEQ AASVLATVKR DNFDRKGEAW SDEDEAAFKA
PIREMYEKQG HPYYATARLW DDGVIDPADT RNVLALALSA AHNAPIEETT FGVFRM
|
|---|
| |