Gene Psyc_0304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0304 
SymbolgltJ 
ID3515108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp373659 
End bp374405 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content45% 
IMG OID637668991 
ProductABC glutamate/aspartate transporter, inner membrane subunit GltJ 
Protein accessionYP_263608 
Protein GI71064881 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTATA GCTGGAACTG GGGTGTGCTT TTTGAGCAAA CTGGTATCGG TAGCGAGCTG 
TATATCCATT GGATGATTAC TGGTCTTGGC TGGTTGTTAT TAATTGGCAG TATTGCTTGG
GCAATCGCCA TGGTGATTGG TACTATTTTT GGAATCATGC GTACTTTGCC TAATAAGACT
GCCCGTGCTA TCGGCACCAC TTATGTGACG TTTTTTCGTA ATATCCCTTT ATTGGTACAA
CTATTCTTCT GGTTTTATAT CGCCCCAGGT TGGCTAACGC CATCCATACA AGAGTGGTGG
TACAAAGACT TGTCTCCTAA TACCTCTGCC ATGCTGTCAG CCAGTATCGG TCTTGGTTTA
TTTACCGCTG CCCGTATTGT GGAACAGGTG CGTACCGGTA TCGAGTCGCT ACCTAAAGGA
CAAATCAATG CCGCCTACGC GCTCGGCTTT AGTATCCCGC AAGCCTATAA AGAAGTGCTG
CTGCCGCAAG CGTTTCGGAT TATCTTACCG CCACTTAGCT CGGAGTTGAC CAACTGCTTT
AAAAACGCTT CGGTTGCGTC TTTAGTAGGG GTGATGGAGC TGATTAGTCA GACCAAAACC
ATTAGTGAAT ACACCCAAAA CAGTCTTGAG ATTTATACCT ATGCGACCAT TATTTATCTG
GTATTCAATT TGTCTTTAAT TGCCATTATG GGGCTGATTG AACGTAAATT GCGTGTGCCT
GGGCTGATTG CAGGGAGTCA AAAATGA
 
Protein sequence
MNYSWNWGVL FEQTGIGSEL YIHWMITGLG WLLLIGSIAW AIAMVIGTIF GIMRTLPNKT 
ARAIGTTYVT FFRNIPLLVQ LFFWFYIAPG WLTPSIQEWW YKDLSPNTSA MLSASIGLGL
FTAARIVEQV RTGIESLPKG QINAAYALGF SIPQAYKEVL LPQAFRIILP PLSSELTNCF
KNASVASLVG VMELISQTKT ISEYTQNSLE IYTYATIIYL VFNLSLIAIM GLIERKLRVP
GLIAGSQK