Gene Psyc_0298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0298 
Symbol 
ID3515102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp365033 
End bp365758 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content45% 
IMG OID637668985 
ProductABC basic amino acid transporter, inner membrane subunit 
Protein accessionYP_263602 
Protein GI71064875 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4160] ABC-type arginine/histidine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTGGA ATTGGCAGGT GATTTTTGAC CATATCCCAG ATTTACTCGG TGGCGCGGTT 
TTAACCGTAC AGCTGGTCAT TTTCTCAGGG GTTATCGGGC TGTTTTTTGG TTTGGTTTTG
GCGCTGTTAC GGCTGTCTAA AAACTGGATG GTACAGATAC TCCCTTTTCT GTATATCTTC
TTTTTCCGTG GCACACCGCT ACTAGTACAG ATATTTTTGA TTTACTACGG TCTTGGGCAG
TTTGAAGCTG TACGTGAGTC TTTCTTATGG GAGCCGGTAC TAAGTCAAGC CTATTGGTGT
GCCATCATTG CTTTTACCCT AAATACCAGT GCTTATTTGG CGGAGATTAT CCGCGGTGCA
ATCCAAAATA TTCCGGTGGG TGAGCTTGAA GCTGCCGATG CGATTGGGAT GTCAAAGTGG
CAAAAACTGA CGCGCATTAC GTTACCGCGT GCCTTTGGTA TCGTGATTCC AGTGTACAGT
AATGAAGTTA TCTTTATGCT AAAAGGTAGT GCGCTAGCGT CAACCATTGC TTTGATGGAT
ATCACTGGCG TTGCCCGTAC CATTAGTGCG CGTACTTATA CCTTGATGGA GCTGTTCTTC
GCTGCAGGTA TCGTTTATCT TTTATTGTCG TGGGTGATTT TATTCAGCTT TAGAATGTTT
GAAAAGCGTA TGAATCGTCA CGCAAGCTAT GTGCCACCAG ATGTGAGCAC GCATACGGTT
GGCTAA
 
Protein sequence
MDWNWQVIFD HIPDLLGGAV LTVQLVIFSG VIGLFFGLVL ALLRLSKNWM VQILPFLYIF 
FFRGTPLLVQ IFLIYYGLGQ FEAVRESFLW EPVLSQAYWC AIIAFTLNTS AYLAEIIRGA
IQNIPVGELE AADAIGMSKW QKLTRITLPR AFGIVIPVYS NEVIFMLKGS ALASTIALMD
ITGVARTISA RTYTLMELFF AAGIVYLLLS WVILFSFRMF EKRMNRHASY VPPDVSTHTV
G