Gene Psyc_0297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0297 
Symbol 
ID3515101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp364285 
End bp365019 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content47% 
IMG OID637668984 
ProductABC basic amino acid transporter, inner membrane subunit 
Protein accessionYP_263601 
Protein GI71064874 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4215] ABC-type arginine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTGATT TACAAGGATT TGGCGCGCTC TTATTGAGCG GTGCTACCGT CACTATACAG 
CTTGCCGTGA CCAGTTTGAT CATCGGCATG GTCTTAGGCT TGCTCGGTGC CACAGCGAAG
CTGTCTAATA TCTGGCTGCT GCGTAAGATT GCGACCGTGT ATACCGCTAC GATGCGCGGT
ATTCCTGAGC TGCTATTGGT GCTGTTTATC TATTATGGCG GCTCTATATT ACTGATGAGT
ATCCTCAAAA AGTTCGGCTA TAACGACTAT GTCGAAATTA GCGCTTTTTG GGGCGGCGTG
ATGGCATTGT CTATCGCTTT TGGTGCTTAT GCGACCGAAA TCTTTCGTAT GTCGATTCAA
GAGATTCCGA TAGGACAGCA AGAAGCGGCG CAAGCAATTG GTATGCGTCC TTTTCAGACT
TTTTATCGCA TTACCTTGCC ACAAGTATGG CAGATTGCGT TGCCAGGATT GGGTAACTTA
TTCTTGGTTT TGCTCAAAGA TACGGCATTG GTGTCGGTTG TAGGTCTTAA AGATATCATG
TATCAGTCCT CGCGCGCGGC GCAGTCAACA CAGCAGCCGT TCACCTTTTA TATGGCGGCG
GCGATTATTT ATTTGGGTCT GACCATGCTG ATTACTGGCT TTATGATGTG GCTTGAATGG
CGTGCCAATC CAGCAGCGCG TTATGCTAAA AAGCTCAGCC GTCAAACCAT TCAACGTCAA
TCGACCATAG GATAA
 
Protein sequence
MFDLQGFGAL LLSGATVTIQ LAVTSLIIGM VLGLLGATAK LSNIWLLRKI ATVYTATMRG 
IPELLLVLFI YYGGSILLMS ILKKFGYNDY VEISAFWGGV MALSIAFGAY ATEIFRMSIQ
EIPIGQQEAA QAIGMRPFQT FYRITLPQVW QIALPGLGNL FLVLLKDTAL VSVVGLKDIM
YQSSRAAQST QQPFTFYMAA AIIYLGLTML ITGFMMWLEW RANPAARYAK KLSRQTIQRQ
STIG