Gene Psyc_0296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0296 
Symbol 
ID3515100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp362760 
End bp363689 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content43% 
IMG OID637668983 
ProductABC basic amino acid transporter, periplasmic binding protein 
Protein accessionYP_263600 
Protein GI71064873 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.511931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGTTG CAATGACCTC ATTAATGACA AAAAAAGCCT TGTGGTTAGC ACCATTAAGT 
GCTGCCATGC TGATGCTGGC AGGTTGTAAT AATAGCGCTG CACCGGTAGA AACTACTGAG
ACAGATGCCG CAACTGACGT GCCTTTAAAT ATCAAAATAG CGACAGAATC AAGCTATAAA
CCTTTTAGCT ATACCGATGC AGATGGTAAG TTAATCGGCT ATGAGATTGA ATTGGTCGAC
GCGCTTTGTG CGCAAATGAA AGCTAAATGT GAAGTCATTT CGCAAGATTG GGATGGACTC
ATTCCAGGTT TGAATGCGCA GAAGTTTGAT GCTGCTATCG CTGGCATGTC AATCACCCCT
GAGCGCAAAG AAGTGGTCGA ATTTAGCGAC CCTTATTTTC ATAGTGGTAT TATCTTAATC
GGTAAGAAAG GCGATGATGT CAGTGTTGAC GCTCTAAAAG GTCAGCCTAT TGCCTCACAG
CGTTCAACGG TTGCCTCGCA ATATCTACAA GATAAACACG CTGACGCTGA CATCAAACTT
TATGATACCC AAGACAACGC TTATTTAGAT CTAACGTCAG GCCGTGTGCG TGCGATGATG
TCTGATAAAG TAACTGGTAT CGACTGGCTA AAAACAGAAG CCGGTAAAGA CTATGAAGTA
AAAGGTCAAG AAATCAGCAC CAGCGATGAT GCGATGGGTA TTGCTTTCCG TAAAGGTGAT
CCATTGGTTG CTAAATTCAA TAAAGCCTTG GCCGAGTTAA AAGACAATGG CACTTATGAT
CAAATCACGG GTAGCTATTT TGGTACCAGC TCAACCACTG CTGCTCAAAA AGCAGTCGCT
GCTAATGATA TCAAAGAAGT AGTAGTCGTA GATAAAGGTA ATGTAGAGGC TGATGCGGTG
ATTGCTAAAG AAGAGCAAGC GCAACGCTAA
 
Protein sequence
MIVAMTSLMT KKALWLAPLS AAMLMLAGCN NSAAPVETTE TDAATDVPLN IKIATESSYK 
PFSYTDADGK LIGYEIELVD ALCAQMKAKC EVISQDWDGL IPGLNAQKFD AAIAGMSITP
ERKEVVEFSD PYFHSGIILI GKKGDDVSVD ALKGQPIASQ RSTVASQYLQ DKHADADIKL
YDTQDNAYLD LTSGRVRAMM SDKVTGIDWL KTEAGKDYEV KGQEISTSDD AMGIAFRKGD
PLVAKFNKAL AELKDNGTYD QITGSYFGTS STTAAQKAVA ANDIKEVVVV DKGNVEADAV
IAKEEQAQR