Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0296 |
Symbol | |
ID | 3515100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 362760 |
End bp | 363689 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637668983 |
Product | ABC basic amino acid transporter, periplasmic binding protein |
Protein accession | YP_263600 |
Protein GI | 71064873 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.511931 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGTTG CAATGACCTC ATTAATGACA AAAAAAGCCT TGTGGTTAGC ACCATTAAGT GCTGCCATGC TGATGCTGGC AGGTTGTAAT AATAGCGCTG CACCGGTAGA AACTACTGAG ACAGATGCCG CAACTGACGT GCCTTTAAAT ATCAAAATAG CGACAGAATC AAGCTATAAA CCTTTTAGCT ATACCGATGC AGATGGTAAG TTAATCGGCT ATGAGATTGA ATTGGTCGAC GCGCTTTGTG CGCAAATGAA AGCTAAATGT GAAGTCATTT CGCAAGATTG GGATGGACTC ATTCCAGGTT TGAATGCGCA GAAGTTTGAT GCTGCTATCG CTGGCATGTC AATCACCCCT GAGCGCAAAG AAGTGGTCGA ATTTAGCGAC CCTTATTTTC ATAGTGGTAT TATCTTAATC GGTAAGAAAG GCGATGATGT CAGTGTTGAC GCTCTAAAAG GTCAGCCTAT TGCCTCACAG CGTTCAACGG TTGCCTCGCA ATATCTACAA GATAAACACG CTGACGCTGA CATCAAACTT TATGATACCC AAGACAACGC TTATTTAGAT CTAACGTCAG GCCGTGTGCG TGCGATGATG TCTGATAAAG TAACTGGTAT CGACTGGCTA AAAACAGAAG CCGGTAAAGA CTATGAAGTA AAAGGTCAAG AAATCAGCAC CAGCGATGAT GCGATGGGTA TTGCTTTCCG TAAAGGTGAT CCATTGGTTG CTAAATTCAA TAAAGCCTTG GCCGAGTTAA AAGACAATGG CACTTATGAT CAAATCACGG GTAGCTATTT TGGTACCAGC TCAACCACTG CTGCTCAAAA AGCAGTCGCT GCTAATGATA TCAAAGAAGT AGTAGTCGTA GATAAAGGTA ATGTAGAGGC TGATGCGGTG ATTGCTAAAG AAGAGCAAGC GCAACGCTAA
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Protein sequence | MIVAMTSLMT KKALWLAPLS AAMLMLAGCN NSAAPVETTE TDAATDVPLN IKIATESSYK PFSYTDADGK LIGYEIELVD ALCAQMKAKC EVISQDWDGL IPGLNAQKFD AAIAGMSITP ERKEVVEFSD PYFHSGIILI GKKGDDVSVD ALKGQPIASQ RSTVASQYLQ DKHADADIKL YDTQDNAYLD LTSGRVRAMM SDKVTGIDWL KTEAGKDYEV KGQEISTSDD AMGIAFRKGD PLVAKFNKAL AELKDNGTYD QITGSYFGTS STTAAQKAVA ANDIKEVVVV DKGNVEADAV IAKEEQAQR
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