Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0295 |
Symbol | |
ID | 3515099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 361873 |
End bp | 362673 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637668982 |
Product | ABC basic amino acid transporter, periplasmic binding protein |
Protein accession | YP_263599 |
Protein GI | 71064872 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.874401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTCGA ATTCTCGCCT ATTGTGGTCA TCGATGACCG TTACCGCCGC GCTCGTATTA GGTGCTTGTA GCCAACCTGC TAATGACGCT GCTGATACCA ATGCAGATAC ACCGGCAGCA GGAACCTCTG GCAAGACCAT TCGTATTGCG ACTGAAGGCG CATACCCTCC TTTTAACTAT ACCAATGCCG ATGGCAGTTT GGCGGGTTTT GATATTGACG TTGCCAATGC TTTATGTGAG CAGATGCAAG CCAAATGTGA AATTGTCGCT CAAGATTGGG ACGGTATTAT CCCGGGTTTA TTGGCGCAAA AATATGATGC GGTCATTGCC GGTATGTCTA TTACTGCCGA ACGTCAAGAA AAAGTCGATT TCAGCGAGCC TTACTTTGCT AATACGATGG TTTGGCTGAC CGACACTAAA GGCAGCTTTG ATCCTAAAGT CATCAAGAAT CTGACGCTTG GTGGTCAACG CTCAACGACG CCGGGTGCTT ATTTACAAGA TAATTATGAA GGCAAAGACG GCAATACCGT TAAGCTTTAT GACAGTTATG ACAATGCTTA TTTGGACCTA AAGTCTGGTC GTAGTGATGT GGTGCTGGCT GAAAAAGTAT CTGCCAAATC ATGGTTAGCA GACAATCCTG AAGGTTTTGG TATCGTTGGT GATGAGATTG ACAATGACGA TAATATTGCC ATTGCTGTGC GTAAAGGCGA TGCAATTAAA GAAGACTTTA ATAAAGCGCT GAGTGAAATT CGCAGCAATG GTGAGCTTGC CCGTCTTGAG CAGAAAAACT TCGGTCAATA A
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Protein sequence | MMSNSRLLWS SMTVTAALVL GACSQPANDA ADTNADTPAA GTSGKTIRIA TEGAYPPFNY TNADGSLAGF DIDVANALCE QMQAKCEIVA QDWDGIIPGL LAQKYDAVIA GMSITAERQE KVDFSEPYFA NTMVWLTDTK GSFDPKVIKN LTLGGQRSTT PGAYLQDNYE GKDGNTVKLY DSYDNAYLDL KSGRSDVVLA EKVSAKSWLA DNPEGFGIVG DEIDNDDNIA IAVRKGDAIK EDFNKALSEI RSNGELARLE QKNFGQ
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