Gene Psyc_0295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0295 
Symbol 
ID3515099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp361873 
End bp362673 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content45% 
IMG OID637668982 
ProductABC basic amino acid transporter, periplasmic binding protein 
Protein accessionYP_263599 
Protein GI71064872 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR01096] lysine-arginine-ornithine-binding periplasmic protein 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.874401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCGA ATTCTCGCCT ATTGTGGTCA TCGATGACCG TTACCGCCGC GCTCGTATTA 
GGTGCTTGTA GCCAACCTGC TAATGACGCT GCTGATACCA ATGCAGATAC ACCGGCAGCA
GGAACCTCTG GCAAGACCAT TCGTATTGCG ACTGAAGGCG CATACCCTCC TTTTAACTAT
ACCAATGCCG ATGGCAGTTT GGCGGGTTTT GATATTGACG TTGCCAATGC TTTATGTGAG
CAGATGCAAG CCAAATGTGA AATTGTCGCT CAAGATTGGG ACGGTATTAT CCCGGGTTTA
TTGGCGCAAA AATATGATGC GGTCATTGCC GGTATGTCTA TTACTGCCGA ACGTCAAGAA
AAAGTCGATT TCAGCGAGCC TTACTTTGCT AATACGATGG TTTGGCTGAC CGACACTAAA
GGCAGCTTTG ATCCTAAAGT CATCAAGAAT CTGACGCTTG GTGGTCAACG CTCAACGACG
CCGGGTGCTT ATTTACAAGA TAATTATGAA GGCAAAGACG GCAATACCGT TAAGCTTTAT
GACAGTTATG ACAATGCTTA TTTGGACCTA AAGTCTGGTC GTAGTGATGT GGTGCTGGCT
GAAAAAGTAT CTGCCAAATC ATGGTTAGCA GACAATCCTG AAGGTTTTGG TATCGTTGGT
GATGAGATTG ACAATGACGA TAATATTGCC ATTGCTGTGC GTAAAGGCGA TGCAATTAAA
GAAGACTTTA ATAAAGCGCT GAGTGAAATT CGCAGCAATG GTGAGCTTGC CCGTCTTGAG
CAGAAAAACT TCGGTCAATA A
 
Protein sequence
MMSNSRLLWS SMTVTAALVL GACSQPANDA ADTNADTPAA GTSGKTIRIA TEGAYPPFNY 
TNADGSLAGF DIDVANALCE QMQAKCEIVA QDWDGIIPGL LAQKYDAVIA GMSITAERQE
KVDFSEPYFA NTMVWLTDTK GSFDPKVIKN LTLGGQRSTT PGAYLQDNYE GKDGNTVKLY
DSYDNAYLDL KSGRSDVVLA EKVSAKSWLA DNPEGFGIVG DEIDNDDNIA IAVRKGDAIK
EDFNKALSEI RSNGELARLE QKNFGQ