Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0287 |
Symbol | icd2 |
ID | 3514181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 350508 |
End bp | 352727 |
Gene Length | 2220 bp |
Protein Length | 739 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637668974 |
Product | isocitrate dehydrogenase |
Protein accession | YP_263591 |
Protein GI | 71064864 |
COG category | [C] Energy production and conversion |
COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAAA TTATTTATAC AAAAACCGAC GAAGCCCCAG CGCTTGCAAC CGTATCATTC TTGCCTATTG TGAAAGCATT TACTCAAACA GCAGGCATCG AAGTTGACAC CATTGATATC TCAGTTGCTG CCCGTGTATT GGCTGAATTC CCTGAATTTT TAAGTGAAGA GCAACGCGTT CCTGACAACT TAGCTGAGCT GGGTCGTCTA ACACAAGATC CAAACACCAA CATCATCAAA TTGCCAAACA TCAGTGCTTC TGTTCAACAG CTTAAAGCGG CGATTAAAGA GCTACAAGGT AAAGGCTATG CTATTCCTGA TTTTCCAGAA GATCCACAAA CGGATAAAGA AATAGAAATT CGTCAGCGTT ATGGCAAAAG CCTAGGTAGC TCGGTGAACC CTGTACTGCG TGAAGGTAAC TCAGATCGCC GTGCGCCAAA AGCGGTCAAA AACTACGCAC GTAAGCACCC ACATTCAATG GGTGAATGGA AGCAATGGTC ACAGACGCAT GTATCGCATA TGCACAGCGG CGATTTCTAT GACGGCGAGC AATCTATCAC TTTAGATAAA GCACGTACCG TGCGCATGGA ACGCTTAGCT GACGATGGTA CTGTCAATGT CTTCAAAACA GGCCTCGCTT TGCTTGATAA AGAAGTCATC GACCTCATGT TCATGAGCAA AAAAGCGCTA CTTGAATTTT ATGAGCGTGA AATGGAAGAC TGCCGTGAAG CGGGCATTTT ATTTTCACTG CACGTAAAAG CAACCATGAT GAAAGTATCG CATCCTATCG TATTTGGGCA TGCAGTTAAA ACATATTATA AAGAGGCCTT CAACAAACAT GGCGCTTTCT TTGATGAATT AGGCATCAAC GTGAATAACG GTATGGTAGA CCTATACGAC AAAATCTCAA AACTACCAGC ATCAACTCGT GAAGAGATTG AACGCGATTT ACATGCTTGC CAAGTACATC GTCCACGTTT GGCGATGGTT GATTCATCAA AAGGTATCAC CAACTTCCAT TCGCCAAGTG ACATCATCGT TGACGCATCT ATGCCAGCCA TGATTCGTAA TGGCGGTAAA ATGTGGGGTG CTGATGGCAA GCCATATGAT TGTAAAGCAG TTATGCCAGA ATCTACCTTT GCGCGCATTT ATCAAGAAAT GATCAATTTC TGTAAATGGC ATGGTAACTT TGACCCAACA ACTATGGGTA CAGTGCCTAA CGTCGGTCTA ATGGCACAAA AAGCGGAAGA ATATGGCTCG CATGACAAGA CTTTTGAAGC GAGTGATAAT GGTATTGCCC GTATTGTTGA CGAAGAAACA AATGAAATTT TGCTTGAACA GCGTGTTGAG AAGGGCGATA TCTGGCGCAT GTGTCAAGTT AAAGACGAGC CTATCCAAGA TTGGGTCAAG CTTGCGGTAC GCCGCGCGCG CGAATCAAAT ACGCCGGTCA TCTTTTGGTT AGACCCATAT CGTCCACACG AAAACGAGCT GATCAAAAAA GTAAAAATGT ATCTAAAAGA TCACGATACC ACTGGTTTAC ATATCGAAAT TATGTCACAA GTTCGTGCCA TGCGTTATAC CTTAGAGCGT GTCGCTCGTG GTCTTGATAC GATTTCTGCT ACCGGTAATA TTTTACGTGA TTATCTCACT GACTTATTCC CAATTTTAGA ATTGGGCACC AGTGCTAAGA TGTTGTCAGT GGTTCCATTA ATGAAAGGCG GCGGTTTGTT TGAAACTGGC GCTGGCGGTT CAGCACCTAA GCATGTACAA CAATTGGTTG AAGAAAACCA CTTACGTTGG GATTCATTGG GTGAGTTCTT GGCATTAACC GTGTCGCTAG AGCATTTAGC ACAGAATGAT GGTAATGCTA AAGCCCAAGT ATTGGCTGAT ACTTTAGACA CAGCGACTGA AAAGCTGTTG TTAGATGACA AATCACCATC ACGCAAAACT GGTGAACTTG ACAACCGTGG CAGTCATTTC TACCTTGCCA TGTACTGGGC ACAAGAGCTT GCAGCACAAG ATAAAGACAG CGAGCTAAAA GCACAGTTTG CTCCACTTGC GCAAAATCTT GCGGATAATG AAGCAGCTAT TATTAAAGAG CTGAATGACG CTCAAGGTAA GCCTATGGAT CTTAAAGGCT ATTACTTAGC AGATGAATCA TTGGTTGAAC AAGCAATGCG TCCAAGCACT TTGTTCAATG CAGCAATTGC ATCCTTATAA
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Protein sequence | MSKIIYTKTD EAPALATVSF LPIVKAFTQT AGIEVDTIDI SVAARVLAEF PEFLSEEQRV PDNLAELGRL TQDPNTNIIK LPNISASVQQ LKAAIKELQG KGYAIPDFPE DPQTDKEIEI RQRYGKSLGS SVNPVLREGN SDRRAPKAVK NYARKHPHSM GEWKQWSQTH VSHMHSGDFY DGEQSITLDK ARTVRMERLA DDGTVNVFKT GLALLDKEVI DLMFMSKKAL LEFYEREMED CREAGILFSL HVKATMMKVS HPIVFGHAVK TYYKEAFNKH GAFFDELGIN VNNGMVDLYD KISKLPASTR EEIERDLHAC QVHRPRLAMV DSSKGITNFH SPSDIIVDAS MPAMIRNGGK MWGADGKPYD CKAVMPESTF ARIYQEMINF CKWHGNFDPT TMGTVPNVGL MAQKAEEYGS HDKTFEASDN GIARIVDEET NEILLEQRVE KGDIWRMCQV KDEPIQDWVK LAVRRARESN TPVIFWLDPY RPHENELIKK VKMYLKDHDT TGLHIEIMSQ VRAMRYTLER VARGLDTISA TGNILRDYLT DLFPILELGT SAKMLSVVPL MKGGGLFETG AGGSAPKHVQ QLVEENHLRW DSLGEFLALT VSLEHLAQND GNAKAQVLAD TLDTATEKLL LDDKSPSRKT GELDNRGSHF YLAMYWAQEL AAQDKDSELK AQFAPLAQNL ADNEAAIIKE LNDAQGKPMD LKGYYLADES LVEQAMRPST LFNAAIASL
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