| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0278 |
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| Symbol | |
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| ID | 3514172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 335859 |
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| End bp | 336467 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637668965 |
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| Product | rhomboid family protein |
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| Protein accession | YP_263582 |
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| Protein GI | 71064855 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTTAATC AGACGACGCT TATCATTATT ATTACGGTTA TTGTCAGTTT GTTGGCGTGG
CAAAACAAAG CACTGTTTAA TCGACTCATT TTTTATCCGC CAGCAGTAAA CAATGGTCAA
TGGGATCGAT TTGTTACTCA TGGATTTATC CATGCTGATA GCATGCACTT GCTCTTTAAT
ATGTTTACCT TATACTTTTT TGGTCGTGCC ATTGAGGGCT TATATCAGAA ATTTTTATTC
GGCTATGGCT TTTTGCTTTT TTATGTACTG GCTATTATTG TCGCGATGAT TCCAAGTTAT
ATTAAGCACA AGCAAAGTGC CAGTTATTTA AGTCTTGGCG CATCAGGCGG TGTATCTGCT
GTATTGTTTG CGTTTATCTT GCTTGCTCCT TGGGAAAAAA TCTATCTGTT TGCGATCATC
CCTATCCCAG CCATCTTATT TGCAGTTGCC TATGTCGCTT ACAGTATCTA TTCTGATAAA
CGCGGCGGCT CAAACATCAA TCATATGGCA CATATGTGGG GCGGCGCGTT TGGTGTCATA
GCTACCATCA TTTTAGAGCC ACAAGTCCTA CCTCATTTTC TAAATGCCCT ATTATCACCT
GGATTTTAG
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| Protein sequence | MFNQTTLIII ITVIVSLLAW QNKALFNRLI FYPPAVNNGQ WDRFVTHGFI HADSMHLLFN
MFTLYFFGRA IEGLYQKFLF GYGFLLFYVL AIIVAMIPSY IKHKQSASYL SLGASGGVSA
VLFAFILLAP WEKIYLFAII PIPAILFAVA YVAYSIYSDK RGGSNINHMA HMWGGAFGVI
ATIILEPQVL PHFLNALLSP GF
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