| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0266 |
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| Symbol | pilU |
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| ID | 3514126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 320393 |
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| End bp | 321514 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637668953 |
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| Product | putative twitching motility protein PilU |
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| Protein accession | YP_263570 |
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| Protein GI | 71064843 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATTG ATAAACTTTT ACAATTGATG ATTAATAAAA ATGGCTCCGA CCTTTTTATC
ACTGCCGATG TCGCACCTTC TATGAAAATC AATGGGAAAA TACTGCCTGT TGGTAAAATA
CCTTTGACCG CTGAGCAAAC CATGAGGCTG GTTAAAGGTG TCATGACAGT CAATCAGCAA
AAAGAATTTG ATGAGACCCA TGAGTGTCAG TTTGCGATTA CTGATCAGGC GCAACAAGCA
CGTTTTCGGG TTAGTGCTTT TATACAGCGC GACATGGCAG GGATGATTTT AAGGAAAATC
GAAAACAAAA TCCCTACTGT CGAAGAGCTA CGTCTGCCGC CAGCGCTAAA AGAGCTGGCA
ATGAAAAATC ACGGTTTGGT TTTATTAGTT GGCGCAACCG GTACTGGTAA ATCAACCACG
CTTGCAGCCA TGATAGGACA TCGTAATCAA AATTCTCATG GTCATATTAT TACCATAGAA
GACCCTATCG AGTTTGTCCA TAAACATCGC GGCTGTATTA TTACCCAGCG CGAAGTCGGT
ATCGACACCC ACTCTTTTGA AACCGGTCTA AAAAATACCT TGCGCCAAGC ACCTGACGTT
ATTTTGATTG GTGAGATTCG TAATCTCGAA GTCATGAGTT ACGCGATTCA ATATGCTGAA
ACGGGGCATT TGGTATTTGC AACCTTGCAC GCCAATAATG CTAACCAAGC AATCGACCGT
ATTATTCACT TTTTTGAGGC CAGTCGCCAT AATCAATTGT TTATGGATTT GTCGCTTAAC
TTGCAGGCCA TTATCGCGCA GAAATTGATT CCAACGCCTG ATGGCAAGGG ACGCCGCGCC
GCTATTGAAA TATTGTTAAA CTCACAGCTG ATTAGCGATC ATATCCGTAA AGGTGATGTG
CATGAGATCA AAGATGTCAT GACACGCTCA CGTGATAGCG GTATGCAAAC CTTTGACCAA
GCTTTGTTTG ATTTATATGA AAATGGTGAA ATTACTTATA AAGAAGCTAT TCTTCATGCT
GATTCTCCCA ATGATTTGCG CTTAAAAATC AAACTCAGCA GCAAAAATGG CGTGGCAAAC
TTAGATGAAG GCGCAGATAG TTTATCGTTA GACATTACCT AA
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| Protein sequence | MDIDKLLQLM INKNGSDLFI TADVAPSMKI NGKILPVGKI PLTAEQTMRL VKGVMTVNQQ
KEFDETHECQ FAITDQAQQA RFRVSAFIQR DMAGMILRKI ENKIPTVEEL RLPPALKELA
MKNHGLVLLV GATGTGKSTT LAAMIGHRNQ NSHGHIITIE DPIEFVHKHR GCIITQREVG
IDTHSFETGL KNTLRQAPDV ILIGEIRNLE VMSYAIQYAE TGHLVFATLH ANNANQAIDR
IIHFFEASRH NQLFMDLSLN LQAIIAQKLI PTPDGKGRRA AIEILLNSQL ISDHIRKGDV
HEIKDVMTRS RDSGMQTFDQ ALFDLYENGE ITYKEAILHA DSPNDLRLKI KLSSKNGVAN
LDEGADSLSL DIT
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