| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0256 |
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| Symbol | |
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| ID | 3514116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 307312 |
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| End bp | 311529 |
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| Gene Length | 4218 bp |
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| Protein Length | 1405 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637668943 |
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| Product | RNAse E |
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| Protein accession | YP_263560 |
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| Protein GI | 71064833 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA TTTTAATCAA CGCCACTCAA AACGAAGAGA TTCGTGTTGC CCTTTGTAAC
GGCAATCATC TGTACGATTT CGATCTTGAA AACCGTACCC GCGAACAAAA AAAATCCAAC
ATCTATAAAG GTCATGTGAC CCGTGTCGAG CCATCGCTTG AAGCGGTATT TGTCGAATAT
GGCTCACAGC GCCAAGGTTT TTTGCCGATT CGTGAAATTT CTGCCGAATA TTTGAGTGGC
AATCCACGTG ATGAAAACAT CAAAAAACTG ATCAAAGAAG GTGACGAGCT CATCGTCCAG
GTTGAAAAAG AGGAACGCGG CAATAAAGGC GCTGCGCTTT CAACTTATGT GTCATTAGCA
GGACGTTATC TGGTATTAAT GCCAAATAAT CCTCGCGGTG GCGGCATCTC TCGTCAAATC
TCAGGTAAAC TGCGCGAAGA TATGAAGCGC ATGCTTGGCA GCTTAGATTT ACCAAAAGGC
ATGAGTGTTA TCATTCGTAC TGCTGGTATC GGTAAAACGC AGGAAGACTT GCAGCACGAT
TTAAATCATT TGCTAAACAT CTGGCAAGCC ATCCAAGAAC AAAACCAAAA ATACCCATCA
CCGCGCTTAG TTCATCAAGA AGCAGGCGTT GTTACGCGTG CTGTCCGTGA CTATTTACGT
GACGATATCG CTGAGATTTG GATTGATAAC GAAAACGCTT ATATTGAAGC AGCGGGCTTT
ATCGATGCCG TTATGCCAAA ACAGGCTGAA AAACTGCGTA AATATACCGA TTATGAGCCG
ATGTTTTCGC GCTTTAATAT CGAAAAGCAG ATTGAAACGG CTTATCAGCG CGAAGTGCGT
CTACCATCAG GTGGCTCAAT CGTTATCGAT CAAACTGAAG CCTTGGTATC TATCGATATC
AACTCCGCCA AATCAACTAA AGGTTCAGAC GTTGCTGAAA CCGCTTACCA TACCAACCTA
GAAGCAGCCG ATGAGATTGC CCGTCAATTA CGCCTGCGTG ATATGGGCGG TTTAATTGTC
ATTGATTTTA TTGATATGAA TGACAACAAG CATCAAAAAG AAGTTGAAAA ACGTCTGATT
GATGCCACCA AATATGACCG TGCCCGCGTG CAATTTGGTG ACATTTCTAA GTTTGGTTTG
ATGGAAATGA GCCGTCAGCG CCTACGTCCA TCGCTAGAAG AGTCAACCGG CTATATTTGC
CCACGCTGTC ATGGCAATGG CATGATTCGT GACCTGCGTT CATTATCGTT ATCAATTATG
CGTCAGATTG AACAAATTGC GCTAAAAGAG CGTCAAGGTG AAGTACAAGC AGAAGTACCG
ACTGATATCG CAGCGTTCTT GTTGAATGAG AAACGCGACA GCTTGGTCTA CCTTGAACAA
GACAGTGGTA CGCGTATCAC CATTTTACCG CATGCGCATC TAGAATCACC AAACTTCAAA
CTTCACTTTA ACCGTGATGG CTTTGCACCA TCAAGCTATG AGCGTATTAC CGACACTCAG
CTGCAAGAAC ATAGCGAGCT TGGTTATAAC GTTGATTGGC AAACAGCTGA AAAAGAGCGA
CCTGAGCAGC AGCCAACTCG CCAGCCTCGT CAAGGTTCTG ATAACAATAA TGGCAGTCAA
GCACAGGTGC GTACTAACAC GCAGCAAAGT GCGCCTACGC AGCAGCAGCA AAGCACCAGC
CATAGCAATG AACATCGCAG TAATAATAAC AGCAATGTGA CATCAGCGCG TGCGCCACAG
ACTAAAGAGA CTCCAAGCGT TCCAAACCCT CAGAGCTCTC AAAATATTGT AACCTCATCA
GCACCAGTAG CGCCTCAACC TACTGCTATT GTTGCTGCTC AGCCGCAAGC CGTCGCTTGG
TTGTCTAATT TATTTGCGCA AGCACCGCAA GCTCAAACCA CATCAAGTGT CAGTAGCCGT
GACGCTGCTG AAGCTATCGA AGCGCTGGTA AATACTGGTG CGCAAAGTCT TGGCTCATTT
GGGCAAGTAG ATAACACAGC TTTAGTGAAT ACTGATAACA GCCAAAACGC TTCAGCACCA
CCGCAATCAA CTAACCAGCA AAGTGGTAAT GAGCAGAATC GTCAACAAAC ACGTTCTGCT
GAGAATAGTA CTGACGATAA CAGCGATGCT GAAGAGAGAA GAAGACGTAA GCCTCGTAAA
TCAAGACCAT CTAAGCCGCG CCAAAGAAAA GAGCAGGCAG ATGAAACTGA AAATAGCACT
GTTAGCAATA CGACTAACAG CAGCGCAACT GGCACTGACG ACAAAGCTGA CAATCAAGAT
AAGCGTCAGC AGGACAATAG ACGTCATAGC GATCGCAATC GCAACAACCG TCAAGACAGC
AATCGCAATA CCAATGAAAA CAACGCTAAT ATAACCACTG CTAATGCAAC CAGTGCCAGC
GACAGCAATC GTTCTGACAG CTCTGATAAC GTAGCAGAAG AGCAAACTCG CACTAAGCGC
AAATCGAACA GCCAACGTGG ATCACGTGGC AAGCTTGAGC GCGGTGAAAC ATTAACAGCA
GCTGACTCTA AGCAAAATAG TCAGCAAGCA TCTAAAGATG CTAACGGTAG CAAAAACCAA
TCTAATGCGC GCCGCAACCA AGACCCTAAC GAAGTGGTAT TACAGGTGAA TGAAGCTGCC
AGTAAGCTCA AATCACCAGA AGTTGTACAC TTGTCATTAG ATGATAGTAA GTCTGCAGCA
CGCCAAGCGA CTCACAAGCA AGCAGCAATT GAAAGTCATG CCGCTGCCGA AAAAGAGCGT
CCAGAGAATA ACACTCAACA GCATGCGGAT AAGCAAAAGT CAGGCGATAA CAAACCAGCG
CAGCAAACTG CTCAAACTGC TCAAACTGCT CAAACTGCTC AAACTGTCGA TACTAGCAGC
GATGCATCTG ATAAAACGCA ACAAAGTAGC GTACAAGCTG ACACTGCTGA AAAAATCTCT
GCACAAGTCA ATACTACTCA GGTCGATCAG GTAGAAAAAA GCACTAATCA TGACAAAGCT
GACCAACCTA CTACTTCGAA AGACAATGAC AAAGGTAGTA GTCACAAACC TGCTGTAGAT
AAGCAAGCTA CTACAAAAAG CAGCACGGGC AATGAAGCGG AGAGTACTGC ACCGATTCAA
GAAGTGATAG CGGTACAAGT AGAAAAGGTA GCGCCAACCG AAACCACTCA GGAAGCTAGT
GTTGCTGCAA GTACTGCCGA AGAAAACGTT GTCGTGGATT CTAACGAAGT TGCTGCTGAG
AATAGTAGCA GTCAGGCAGG GCTTGAGCTT ACCCATGATG CTTTATTTGC CAAACGCTAC
ATTACAGCAA ATAAGTTTGG TCAAGCGAGT AACGACCCAC GCTTAGTACG TCGTCAGCAG
GCGCAATCAT CAGTTGCTGA AGCGTCTCAC GCAAATGAGC AAGATGTGCA AGTTACTGTG
AGCGCACCGA CTATTCGTGG TACGGTTGGC GAGTTTATCC GTGCAACATT AGCAGAGGCA
GAAAATCGCT TAGCGACAGA CGGTGTCATC AGCTGCTTTA ATGCTGCTAT AGCCATGCAT
CAAGAGCAGG CTAAAGTTAA GGATACCGCT GACAAGCAAG TTGCCACTAA ACCAGTTGCT
CATAGCGGCT TTGAGTTTAG TAACTACGGC TATCAACCTT TAGCAGCGGA TTACCTTGCA
CGCTTTGAGT CAATGACGCA AGCCGTCAGT CAGTTTGCAG CTGCCCAAGG TAAAACATCA
GTAGAACCAC GCGCTATCAG CAAACGTGCC AGTAACGATC CACGTGGTCA GCATCCTGAC
TATAAAGAAT CGGCTGTATT GACTGTTGTT GACCCGGCAA ATAACGAGCC CGTTCAAACT
GGTATTGATA TTGATGCGAA TAAAGTAGAA GCCGATGCTC TGGCCAATCA AGCTCAAACA
GATGCTGTCA GTGATCAAAG TAAGCAGTTA TTAGATGCTG AGCAAACACC AGCTGAAGTA
GATACAGTGC AAGCTGATGA ATCAATAGTA GCACCCTTTT CCAAAGAGGA CAGTCAGGCA
GCCAAGTCAA AAACGACGAT AGCCAGTTAT AAGAACATGA TCGAAAATGT GGCCGAGCAA
TTACTACCAC AAAAAAGCAT GTTCAACTTA ACAACGCCTA AAGTACCAAA GGCTCGCGCC
CGTAAGCCAA AAGCTGACCA TAAAAAGCCG ACGCAAGCTG AAAAAGTAGA GTCAGATAAC
TCAGATAACG AAAGCTAA
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| Protein sequence | MKRILINATQ NEEIRVALCN GNHLYDFDLE NRTREQKKSN IYKGHVTRVE PSLEAVFVEY
GSQRQGFLPI REISAEYLSG NPRDENIKKL IKEGDELIVQ VEKEERGNKG AALSTYVSLA
GRYLVLMPNN PRGGGISRQI SGKLREDMKR MLGSLDLPKG MSVIIRTAGI GKTQEDLQHD
LNHLLNIWQA IQEQNQKYPS PRLVHQEAGV VTRAVRDYLR DDIAEIWIDN ENAYIEAAGF
IDAVMPKQAE KLRKYTDYEP MFSRFNIEKQ IETAYQREVR LPSGGSIVID QTEALVSIDI
NSAKSTKGSD VAETAYHTNL EAADEIARQL RLRDMGGLIV IDFIDMNDNK HQKEVEKRLI
DATKYDRARV QFGDISKFGL MEMSRQRLRP SLEESTGYIC PRCHGNGMIR DLRSLSLSIM
RQIEQIALKE RQGEVQAEVP TDIAAFLLNE KRDSLVYLEQ DSGTRITILP HAHLESPNFK
LHFNRDGFAP SSYERITDTQ LQEHSELGYN VDWQTAEKER PEQQPTRQPR QGSDNNNGSQ
AQVRTNTQQS APTQQQQSTS HSNEHRSNNN SNVTSARAPQ TKETPSVPNP QSSQNIVTSS
APVAPQPTAI VAAQPQAVAW LSNLFAQAPQ AQTTSSVSSR DAAEAIEALV NTGAQSLGSF
GQVDNTALVN TDNSQNASAP PQSTNQQSGN EQNRQQTRSA ENSTDDNSDA EERRRRKPRK
SRPSKPRQRK EQADETENST VSNTTNSSAT GTDDKADNQD KRQQDNRRHS DRNRNNRQDS
NRNTNENNAN ITTANATSAS DSNRSDSSDN VAEEQTRTKR KSNSQRGSRG KLERGETLTA
ADSKQNSQQA SKDANGSKNQ SNARRNQDPN EVVLQVNEAA SKLKSPEVVH LSLDDSKSAA
RQATHKQAAI ESHAAAEKER PENNTQQHAD KQKSGDNKPA QQTAQTAQTA QTAQTVDTSS
DASDKTQQSS VQADTAEKIS AQVNTTQVDQ VEKSTNHDKA DQPTTSKDND KGSSHKPAVD
KQATTKSSTG NEAESTAPIQ EVIAVQVEKV APTETTQEAS VAASTAEENV VVDSNEVAAE
NSSSQAGLEL THDALFAKRY ITANKFGQAS NDPRLVRRQQ AQSSVAEASH ANEQDVQVTV
SAPTIRGTVG EFIRATLAEA ENRLATDGVI SCFNAAIAMH QEQAKVKDTA DKQVATKPVA
HSGFEFSNYG YQPLAADYLA RFESMTQAVS QFAAAQGKTS VEPRAISKRA SNDPRGQHPD
YKESAVLTVV DPANNEPVQT GIDIDANKVE ADALANQAQT DAVSDQSKQL LDAEQTPAEV
DTVQADESIV APFSKEDSQA AKSKTTIASY KNMIENVAEQ LLPQKSMFNL TTPKVPKARA
RKPKADHKKP TQAEKVESDN SDNES
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