Gene Psyc_0219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0219 
SymbolhemF 
ID3514793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp257347 
End bp258357 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content48% 
IMG OID637668906 
Productcoproporphyrinogen III oxidase 
Protein accessionYP_263526 
Protein GI71064799 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0408] Coproporphyrinogen III oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0901124 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCC CAAATATAGA CAACGATATC AAAGTGTCAT CGACCGATGC AACAACGATA 
CCAAGTCATC ATGACATCAT GCGTGTGCGT GAATTTCTAG TCGATTTGCA AGCACGTATC
TGCCAAGCGT TAGAAGCACA AGAGCGCGAT GGCTGCGCTG ATGCGCATAA AGCCGCTACC
TTTTTTCCTG ATGATTGGGA GCGCCCTGAA GGCGGCGGGG GTCGCTCGTG CGTATTGGCA
GATGGCGAGG TGATTGAAAA AGCCGGCGTC ATGTTTAGCC ATATTCACGT CCAAAACCTG
CCTGCTTCAG CAACCGCCCG TCATCCTGAT ATTGCCGGTC GTAAAGCACA GGCGATGGGT
GTCTCATTGG TTGTCCATCC AAAAAACCCT AACGTCCCCA CTAGCCATGC CAATGTGCGG
TTATTTATTG CCGAAGCAGA AGGCAAAGAC CCTATTTGGT GGTTTGGTGG CGGTTTTGAT
TTAACCCCAT TTTATCCTGT GCTTGCTGAC TGCATCCATT GGCATCAGGT TTGTCATGAT
CTTTGTGCGC CTTTTGGCGA TACTGTCTAT CCTGATTTTA AGCAGTGGTG CGATGAGTAT
TTCCACCTAC GTCACCGCGA TGAGCAGCGT GGTATCGGCG GCTTGTTTTA TGACGACGTC
AATACTGAGA GCCGCGGTTG GGATTTTGAA ACCTGCTTTA AATTTATGCA AGCGGTTGGT
AACGGCTACC TTGAGGGTAT CCTGCCAATT TTTGAGCAGC GTAAAAATGC GCCCTATACC
GAAGCGCAGC GTGAATTTCA GCTCTATCGC CGTGGCCGCT ATGTTGAATA CAACCTCGTT
TATGACCGCG GCACCCTATT TGGACTACAA AGCAATGGAC GTATTGAATC CATCTTAGTC
AGTATGCCTC CGCTTGCTAG CTGGCATTAT CGCTTTGAGC CAATTGAGGG TACACCTGAG
TTTGAATTGA CTGATTTTTA TCTAAAACCA CGCGATTGGT TGATTTTATA G
 
Protein sequence
MSIPNIDNDI KVSSTDATTI PSHHDIMRVR EFLVDLQARI CQALEAQERD GCADAHKAAT 
FFPDDWERPE GGGGRSCVLA DGEVIEKAGV MFSHIHVQNL PASATARHPD IAGRKAQAMG
VSLVVHPKNP NVPTSHANVR LFIAEAEGKD PIWWFGGGFD LTPFYPVLAD CIHWHQVCHD
LCAPFGDTVY PDFKQWCDEY FHLRHRDEQR GIGGLFYDDV NTESRGWDFE TCFKFMQAVG
NGYLEGILPI FEQRKNAPYT EAQREFQLYR RGRYVEYNLV YDRGTLFGLQ SNGRIESILV
SMPPLASWHY RFEPIEGTPE FELTDFYLKP RDWLIL