| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0207 |
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| Symbol | rpoH |
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| ID | 3514781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 246530 |
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| End bp | 247555 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637668894 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_263514 |
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| Protein GI | 71064787 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00507389 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000595744 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCTAATA CCACTACTAA TGCTGCAAAT ACCCGTAAAA AAGACAGCGC CGCTCCTGAA
AAAAACGAAG CGCGCGAGGC GGCATTAAAG GCGGCAGCTG AGCGTCCGCC TTATGATGCC
AGCGCGCTCG GCGATACCAG TACGCGCGAT TTGGTACCAG CTATGCCAAC GCATTTGTCC
GCGCCTGGGG TGAATTTGGG TGCTTATATC AACACTGTCC ATCAAATCCC TATCTTGACT
CCGACCCAAG AGCAAGAGCT TGCCCATCGC TATTATGATG AAGGCGATGT AGAAGCTGCA
CGTCTGCTGG TCATGTCGCA TTTGCGTTTT GTCATTCATA TCGCACGCAG CTATTCAGGT
TATGGGTTAC CGCAAGCAGA TTTGATCCAA GAAGGCAATT TGGGACTGAT GAAGGCAGTA
AAACGCTTTG ATCCTAATAA AGGCGTACGT CTAGTATCAT TTGCAGTGCA TTGGATTAAG
GCGGAAATTC ATGAATTTGT CATTCGTAAC TGGCGCATTG TAAAAGTTGC CACTACCAAG
GCGCATCGTA AACTGTTCTT TAACTTACGT AGTCTCAAAA AGACCAATAA TCAGTTGACG
ATTGAAGAAG CCGATGCGAT TGCCAATGAC TTGAACGTCA CCCGTAAGCA AGTGCTTGAG
ATGGAGTCGC GTCTTACCTC TTACGATGCA TCGTTTGAGG CGCAATCGAG TGATGACGAT
GACGGACGTT ATGCACCGCA GTTGTTTTTA GAAGATGGCA TTGACCCTGC CGAGATTGTC
GAAGAATCTG ACTGGGAAGA AAACAACTCA TCAGCCTTGA TTGCTGCAAT GGAAACCTTA
GATGATCGCT CTCGTGATAT TGTCGAGCAG CGCTGGTTAT CTGAGCAAAA GTCAACGTTG
CATGAATTGG CAGCGGTCTA CTCTATCTCT GCAGAACGCG TACGCCAGAT TGAAAAAAAT
GCCATGGACA AAATCCGTGA AGCGATGACC ATCGATAGTG TGATTTTACC TGATGATATT
CAATAA
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| Protein sequence | MANTTTNAAN TRKKDSAAPE KNEAREAALK AAAERPPYDA SALGDTSTRD LVPAMPTHLS
APGVNLGAYI NTVHQIPILT PTQEQELAHR YYDEGDVEAA RLLVMSHLRF VIHIARSYSG
YGLPQADLIQ EGNLGLMKAV KRFDPNKGVR LVSFAVHWIK AEIHEFVIRN WRIVKVATTK
AHRKLFFNLR SLKKTNNQLT IEEADAIAND LNVTRKQVLE MESRLTSYDA SFEAQSSDDD
DGRYAPQLFL EDGIDPAEIV EESDWEENNS SALIAAMETL DDRSRDIVEQ RWLSEQKSTL
HELAAVYSIS AERVRQIEKN AMDKIREAMT IDSVILPDDI Q
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