| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0199 |
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| Symbol | lysA |
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| ID | 3514535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 237623 |
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| End bp | 238954 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637668886 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_263506 |
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| Protein GI | 71064779 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00258223 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCAGT CAGTCACTAC CCAAACTGAG CAAGGACTGT ACATCAATCC TGAAGCTTTA
ACTGCCCATT TGCCTGCGCT ACATTACCAA AATGATGCGC TACATATGGA GCAAGTAAGT
ATTACCGAAG TGGTTAAACA TTATGGTACG CCATGTTATG TCTATTCAAA ACAGGCGATT
TTAGCGGTCT ATCAAGCATA CACTGACAGT TTTGCTAGCT TAAATCACCA GATTTGTTAT
GCGGTAAAAG CAAACTCTAA CCTTGCTGTA CTTGGCGTAT TGGCGCAAGC GGGAGCAGGG
TTTGATATCG TCTCACGTGG TGAGCTGATG CGGGTATTGG CGGCAGGTGG CGAAGCTTCG
CGCGTGGTAT TCTCAGGCGT CGGCAAGACC TATAGCGATA TTGAATATGC GCTTAACCAA
AGTATTGGTT GCTTTAACGT CGAGTCCATT AGCGAGCTGA CTTTAATCAA TGACGTTGCA
AAGGCACTAG ATAAATCAGC GCCGATATCA CTACGTGTCA ATCCTGATGT CGATGCCAAA
ACCCATCCTT ATATTTCAAC AGGTCTCAAA GACAATAAGT TCGGTATCGC TCACGAAGAT
GCGCTGGTCG TTTATCAGCA AGCAGCCAAA TTGTCTCATA TCAATATCGT CGGTATTGAC
TGTCATATCG GCTCGCAGTT GACTGAGGTT GAGCCATTCG TTGCCGCATT GGACAAAGTG
ATTGAACTGG TGCATAGCTT AGGTAAAGTA GGTATTGAGC TGCGTCATAT CGATTTAGGC
GGTGGTCTGG GTGTACGTTA TATCGATGAG ACACCAGTGT CTATCGATGA ATTTGCCAAT
GCTTTATTAC CGAAACTTAG CAAACTTGGC TTGACGGTGT TCTTCGAGCC GGGTCGTAGT
ATCGTTGCTA ATGCGGGTAT CTTATTGACG CAAGTTGACG TACTAAAACC GACTGAGCAT
AAGAATTTTG CCATTGTCGA TGCGGCAATG AACGATTTAA TTCGTCCTGC TTTATATCAA
GCTGAAATGG CAGTGATTCC AAGCGCATTA CCTAATAATG GTATCGATAC GGAAGGTACG
CAGCCGTGGG ATATCGTTGG CGCCATTTGT GAAACGGGTG ATTTTTTGGC GAAAGACCGT
TTATTATCGC TCGCTACAGG GGATGTCTTA GCGATTACGG GTGCTGGCGC TTATGGCTTT
ACCATGAGTA GTAACTATAA TTCACGCCCG CGAGCTAGTG AGGTCATGGT AGCTGATGAT
CGCCATCAGC TAATTCGCAA ACGTGAAAGT ATTGAAGCGC TATATGCAGA CGAAGTATTG
TGGCAAGGTT AA
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| Protein sequence | MSQSVTTQTE QGLYINPEAL TAHLPALHYQ NDALHMEQVS ITEVVKHYGT PCYVYSKQAI
LAVYQAYTDS FASLNHQICY AVKANSNLAV LGVLAQAGAG FDIVSRGELM RVLAAGGEAS
RVVFSGVGKT YSDIEYALNQ SIGCFNVESI SELTLINDVA KALDKSAPIS LRVNPDVDAK
THPYISTGLK DNKFGIAHED ALVVYQQAAK LSHINIVGID CHIGSQLTEV EPFVAALDKV
IELVHSLGKV GIELRHIDLG GGLGVRYIDE TPVSIDEFAN ALLPKLSKLG LTVFFEPGRS
IVANAGILLT QVDVLKPTEH KNFAIVDAAM NDLIRPALYQ AEMAVIPSAL PNNGIDTEGT
QPWDIVGAIC ETGDFLAKDR LLSLATGDVL AITGAGAYGF TMSSNYNSRP RASEVMVADD
RHQLIRKRES IEALYADEVL WQG
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