| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0195 |
|---|
| Symbol | nadD |
|---|
| ID | 3514531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 231882 |
|---|
| End bp | 232766 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637668882 |
|---|
| Product | nicotinate-nucleotide adenylyltransferase |
|---|
| Protein accession | YP_263502 |
|---|
| Protein GI | 71064775 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1057] Nicotinic acid mononucleotide adenylyltransferase |
|---|
| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR00482] nicotinate (nicotinamide) nucleotide adenylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0212009 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAATA TTGCCAATAA TAATCACAGC CAAATTTCTA AGTCTGCCAT CCGTGCTTAT
TTGGGCGGCT CATTTGATCC CGTGCATAAT GGTCATTTGC AAATGGCGAT GTATGTTTAT
GAGTATTTAT TACCAATAGC GGAGCAGCAA CAGCGCCCGC TGTATGTATC GTTGCTGCCT
AATGCGCGCT CACCTTTTAA AGAAAACAGC ACCAATCCTG AGCATCGTCT GGCAATGCTA
AAACTGGCAA CCCAAGAGTC GCCCTTATAC ATTAACGAGC TTGAACTGTG GCAAGTACCG
CCTGTCTATA CTATCGATAG CGTACAAACA CTGCGCGCAC GCTATCCAAA TGACAGTCTG
ATATTTATCA TGGGTATGGA CAGCGCGCGT AGCTTGGAAC AATGGAAGGA TGGTCTACAA
CTGACTGATT ATGTCAATCT ATGGGTTTTT AATCGTGAGA AAAATTCTGA TATTAATAAA
AGATTTTCTG AGACCAATTT GCAAACTCAG TTGAAATCGC AACTTCCTGT GCTATTGCAA
CCTTCAACCA TTAACTCACC TGCTGAACTC GTAACACTCA CTTCTCGAAA TATAACAGAC
AGCACCATCT TAAAAAACGC TTATCAAGGT CGCATTTACC TAGACCCGCG CCCTGTGGCA
GCCATATCAA GCACGCAAGT ACGTCAGCAA CTGCGCCAAC CACTACCGCA AGCGCCTCAA
TCATTAAATA TAAAGCACAG CGCTGAAACG CAAATTGCAT CTTTACAACC AATAAATGAT
ATCATAGGCA ATACTGCACC CAATTCATTA GCTAAATGGT TAAATCCTGC TGTTTATCAA
TATATTATCG CCCATCAGCT ATATTCTGCT GCTCAATTCC GTTAA
|
|---|
| Protein sequence | MLNIANNNHS QISKSAIRAY LGGSFDPVHN GHLQMAMYVY EYLLPIAEQQ QRPLYVSLLP
NARSPFKENS TNPEHRLAML KLATQESPLY INELELWQVP PVYTIDSVQT LRARYPNDSL
IFIMGMDSAR SLEQWKDGLQ LTDYVNLWVF NREKNSDINK RFSETNLQTQ LKSQLPVLLQ
PSTINSPAEL VTLTSRNITD STILKNAYQG RIYLDPRPVA AISSTQVRQQ LRQPLPQAPQ
SLNIKHSAET QIASLQPIND IIGNTAPNSL AKWLNPAVYQ YIIAHQLYSA AQFR
|
|---|
| |