| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0181 |
|---|
| Symbol | fadH2 |
|---|
| ID | 3514218 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 210870 |
|---|
| End bp | 213005 |
|---|
| Gene Length | 2136 bp |
|---|
| Protein Length | 711 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637668868 |
|---|
| Product | 2,4-dienoyl-CoA reductase |
|---|
| Protein accession | YP_263488 |
|---|
| Protein GI | 71064761 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.126042 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCA GCCATACTGC CAATTCGATT GACACTGCCA GCTTGAACGA ACACTACCCG
CATTTATTTG AGCCGCTCGA TTTGGGCTTT ACTACGTTAA AAAACCGTCT GGTAATGGGC
TCGATGCATA CGGGACTTGA AGACCGTTTT TATAACTACG GTAAACTGGC GGCGTATTTT
GCAGAACGTG CCAAGGGCGG CGTGGCGATG ATGATCACGG GCGGTATCTC GCCCAATCGT
GAAGGTTGGT TGCTACCTGC TAGTGGTACG ATGAATACGC GCGCTGACGT CCTCAATCAT
CAGCGTGTCA CTCGTGCCGT GCATAAGTAT GACAGCAAAA TTATCATGCA AATCTTGCAT
AGTGGTCGCT ATGGTTATCA CCCTTTTGTT GTCTCATCAA GCCCTATTAA ATCGCCAATC
TCGCCTTTTA AACCGCGTAA GATGAGCATC AAAAACATTG AGCAGACAGT AAAGGATTAT
GCTCGTTCTG CAAAACTCGC CAAACAGGCA GGTTATGATG GTGTCGAAAT CATGGGCTCA
GAAGGCTATT TGCTCAATCA GTTTTTATCG CGTCACGTCA ATAAACGTAC GGACGAATAT
GGCGGTGATA TCCAAGGACG CATGAAGCTA GCAGTCGACG TGGTCAAAGC CGTACGCGAG
GCTGCCGGTG AAGATTTTAT TATGTTATTC CGTCTATCGG TTATCGATTT GGTCAAAGAC
GGCAACGTCA TGGATGAAGT CATCATTGTT GCCAAAGCGC TAGAAGAAGC CGGCGTCACC
ATTATGAATA CCGGTATCGG TTGGCATGAA GCGCGTGTGC CGACGATTGT AACCAGCGTA
CCGCGTGCTG CCTTTGTTGA TTTCACTGCT GAGATTAAAA AGCACATCAG CATCCCAATG
ATGGCCGCCA ACCGTATCAA TATGCCAGAA ACCGCAGAAG AAATTGTGGC TAGTGGCCAA
GCAGATTTGA TTCAAATGGC GCGTCCTTTC TTAGCTGATG CGCATTGGGT GAATAAAGCC
AAAGACGGTC AAGCCGATCG TATCAATACT TGTATCGCTT GTAACCAAGC CTGCCTTGAC
CATACTTTTG ACAATAAACG CTCAACATGT CTGGTTAATC CGCAAGCCTG CTATGAGACG
GAATTGGTTT ATAAGAAAAC CAAGAAACCT AGAAAAGTCG CCGTCATCGG TGGCGGTGTT
GCCGGTATGT CAGCGGCGCA CGTCGCCGCG CTACGTGGTC ATGAGGTGAC CTTATTTGAA
GCAAAAGATA TCTTAGGCGG GCAGTTTAAC TATGCCAAAG TGATCCCTGG TAAAGAAGAG
TTCTTTGAGA CCATTCGCTA CTACATCAAT GAGCTTGAGC ACTTAGGCGT TGAGATTAAA
CTCAATACCA AAGTCGATAA AGCCATGCTG GAAAAAGCCA AGTTCCATCA TGTCATCGTT
GCAACCGGTG TTGTACCTAG AAGCCTAGCA GGCAAGTTAG AAGGCGCTGA TTTGCCGCAA
GTGATGAGCT ATGCTGAATT GCTCTCTGGT GAAAAATCAG TCGGCGCAAC CGTTGCTGTC
ATCGGTGCTG GTGGTATCGG CTTTGACGTC AGTGAATATC TCACTGCCAA ACATGGTCAG
CCGCTTGATG AGCTAGACCC TGAGTTATTA AAAGATTCAA GCTACCGTCC GAAAGCCCAG
TCTATCGAAG AGTGGCGTGA AGAGTGGGGC GTCACCTCTG CTACCGATTA TCAAACAGAG
GGTGGTCTCA TCAAGACTGG CGACATTACC CCTGTTCGCC AAGTGTATTT GATACAGCGT
ACTAAAGGTC GCTTGGGCAG TGGTCTCAAT AAAACGTCGG GCTGGGTACA TCGCGCGCAT
GTCAAATCAC ACGGCGTTAT CCAAGTATCA GGTGCTCAGT ACGATAAAAT CACCAATGAA
GGTATCTGGA TCACCAATAA TCAAGGTCAA AGCCAGCTGC TACGGGTCGA TAGTGTCGTG
GTCTGTGCCG GTCAAGAATC AGTCGTCGAG CTAATGCCAA ATGTCGGTGA TGCCCCAGAC
GCGCAATACC ATCTCATCGG CGGTGCAAAG TTGGCGGCTG AGCTCGATGC CAAACGTGCG
ATTCGTGATG GTGCTGAGGT TGCAGCGAGT ATTTAA
|
|---|
| Protein sequence | MTASHTANSI DTASLNEHYP HLFEPLDLGF TTLKNRLVMG SMHTGLEDRF YNYGKLAAYF
AERAKGGVAM MITGGISPNR EGWLLPASGT MNTRADVLNH QRVTRAVHKY DSKIIMQILH
SGRYGYHPFV VSSSPIKSPI SPFKPRKMSI KNIEQTVKDY ARSAKLAKQA GYDGVEIMGS
EGYLLNQFLS RHVNKRTDEY GGDIQGRMKL AVDVVKAVRE AAGEDFIMLF RLSVIDLVKD
GNVMDEVIIV AKALEEAGVT IMNTGIGWHE ARVPTIVTSV PRAAFVDFTA EIKKHISIPM
MAANRINMPE TAEEIVASGQ ADLIQMARPF LADAHWVNKA KDGQADRINT CIACNQACLD
HTFDNKRSTC LVNPQACYET ELVYKKTKKP RKVAVIGGGV AGMSAAHVAA LRGHEVTLFE
AKDILGGQFN YAKVIPGKEE FFETIRYYIN ELEHLGVEIK LNTKVDKAML EKAKFHHVIV
ATGVVPRSLA GKLEGADLPQ VMSYAELLSG EKSVGATVAV IGAGGIGFDV SEYLTAKHGQ
PLDELDPELL KDSSYRPKAQ SIEEWREEWG VTSATDYQTE GGLIKTGDIT PVRQVYLIQR
TKGRLGSGLN KTSGWVHRAH VKSHGVIQVS GAQYDKITNE GIWITNNQGQ SQLLRVDSVV
VCAGQESVVE LMPNVGDAPD AQYHLIGGAK LAAELDAKRA IRDGAEVAAS I
|
|---|
| |