Gene Psyc_0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0176 
SymbolhemA 
ID3514213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp204616 
End bp205995 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content49% 
IMG OID637668863 
Productglutamyl-tRNA reductase 
Protein accessionYP_263483 
Protein GI71064756 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0373] Glutamyl-tRNA reductase 
TIGRFAM ID[TIGR01035] glutamyl-tRNA reductase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.115712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTAG TGGTCATTGG GGTCAATCAC AAAACTGCAC CAGTCGCTCT ACGAGAGCGC 
TTGGCGCTTG TCGGTGACGA TGTCAATATC GCACTTGCGC AGCTACAAGG CTTTAGCGAC
GGTAGTGTGA TAGTCTCCAC TTGCAACCGC ACAGAGATTT ATGCGTTAGT CCCAGAAAGC
ATATTATCAC CGAACACATT GTTAGCAAGC TCAGCCTTAT CCGTTGTAGA GTCTAGTATT
TCGCTTAACA GTAGCACCAA CATATCATCG ACTATCATCA GCGCTCACAT CCTAAAAATT
AAAACTTGGC TTGCAGATTT TAAGCAGTTG TCACTGGACG AGATTGACCC TTATTTATAT
GTCCATCGTG ATATGCACGC TTTAACCCAT TGGCTACGGG TCGCTGCAGG TCTTGACTCT
ATGATATTGG GTGAGCCGCA AATACTTGGG CAAATCAAGC GTGCTGTGCA TCTGGCGCAA
GACCAAAAAG CGCTTAGCAA TCAGCTAGGC TGGATTGTTG ATCAGGTATT TGCAGCGGCA
AAACGTGTAC GTAATGAGAC GCAAGTGGGT GCACAAGCCG TATCACTTAG CTATGCTGCT
GCCAAACTGG TGACGCAAAT CTTTGATGAT TTGCCAAGTC GCACGCTATT GGTGGTAGCC
GCTGGCGAGA TGAATCGTTT GGTAGCGATG CATATCGCAG GTCTTGGGGT CGGGCGCATT
ATTATTTGTA ACCGTAATCC TGAGCGTGCA GAAGCTTTAG CCGCTGAGCT GCGTAATCCC
AAGCGCCAGA TCGAAGTCAG AACGCTGCAA GAGCTGCCAC AAGTATTGGC AGAAGCCGAT
ATTGTGAGCA GCTGTAGCGG TAGCATGGAC ATATTGATTG ATAAAACTAT GACGCTGCGG
GCATTAAAAA GCCGTCGCTA TCAGCCGATG CTGATGATTG ACTTGGCGGT GCCGCGTGAT
ATTGATTCAA CCGTTAGCCG TATAGACGAT GTCTATCTAT ACTCTGTCGA TGATTTGCAG
CATGTGATAG CCGGTAATAT CGAACAACGC CGCCAAGCAG CCGTCGATGC GGAGCTGTTG
GTCAGTCAAT TGGTGGTTGA GATGGATCGC CGTTTTCAAG TGCGCCAAGT AGGCAAGGAT
ATCCAGCAGT ATCGGTCGCG TACCCATGAG CAGGTAGACA AACTATTGCA GGAGTCTATT
GCCAAGCTGC AAGGCGATAA TGCTAACCCT GAAGATATCA TGATTGAGCT GACGCGGCGC
TTAACGCAAA ACTTGACCCA CGCGCCCTCC AAGCTCATGC GTAAAGCGGC GCGCGAAGGT
GACAATGAAT TACTCGACTT TGTCGTATCA GGTCTACAAG ACGCCCATCG ACATCACTGA
 
Protein sequence
MRLVVIGVNH KTAPVALRER LALVGDDVNI ALAQLQGFSD GSVIVSTCNR TEIYALVPES 
ILSPNTLLAS SALSVVESSI SLNSSTNISS TIISAHILKI KTWLADFKQL SLDEIDPYLY
VHRDMHALTH WLRVAAGLDS MILGEPQILG QIKRAVHLAQ DQKALSNQLG WIVDQVFAAA
KRVRNETQVG AQAVSLSYAA AKLVTQIFDD LPSRTLLVVA AGEMNRLVAM HIAGLGVGRI
IICNRNPERA EALAAELRNP KRQIEVRTLQ ELPQVLAEAD IVSSCSGSMD ILIDKTMTLR
ALKSRRYQPM LMIDLAVPRD IDSTVSRIDD VYLYSVDDLQ HVIAGNIEQR RQAAVDAELL
VSQLVVEMDR RFQVRQVGKD IQQYRSRTHE QVDKLLQESI AKLQGDNANP EDIMIELTRR
LTQNLTHAPS KLMRKAAREG DNELLDFVVS GLQDAHRHH