| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0172 |
|---|
| Symbol | prsA |
|---|
| ID | 3514207 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 198705 |
|---|
| End bp | 199652 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637668857 |
|---|
| Product | ribose-phosphate pyrophosphokinase |
|---|
| Protein accession | YP_263479 |
|---|
| Protein GI | 71064752 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
|---|
| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0093989 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTATT TAGCGATTTT TACGGGTAAT GCCCACCCTG AATTAGCAAA AACCGTAGCC
GATCATCTCC ATATACCTCT TGGTAAAGCT GACATCACGC GTTTTTCTGA TGGCGAAATT
GCCGTAGAAA TCAAAGAACA CGTGCGCGGT AAAGACGTGT TTATTATGCA GCCTACTTGC
GCACCGACTA ATGACAATTT GATGGAAATC ATGATGATGG CCGATGCCTT GCGTCGCTCT
AGTGCTGGTC GTATCACAGC TGTCATGCCT TATTTTGGTT ATGCTCGTCA AGACCGTCGT
CCTCGTTCAG CTCGTGTGCC TATTTCTGCC AAAGTCGTCG CTGACATGTT GAACATCGTT
AGTATCGATC GCGTGATGAC TGTTGATTTG CACTCAGATC AGATTCAAGG TTTCTTTGAT
ATCCCAGTCG ATAATATCTA CGGCACGCCT GTATTACTTA ATGACCTACA AAAACAAAAT
TATGACAATA TCATGGTTGT CTCGCCTGAC GTCGGCGGTG TGGTTCGTGC ACGCGCGATG
GCTAAGCAGT TGGGCGATAC CGACATGGCG ATTATTGATA AACGTCGTGC CCGTGCCAAT
GAGTCACAAG TGATGCACAT CATCGGTGAC GTCCGTGACC GTGATTGCGT CATCGTTGAT
GACATGGTCG ACACCGCAGG CACACTATGT AAAGCTGCCG AAGCACTCAA AGCAAACGGC
GCACGCCGTG TGGTGGCTTA TATCACTCAC CCTGTGTTAT CTGGTAATGC GTTAAAGAAC
ATCAGTGAAT CGGAATTGGA TGAGATTGTG GTTACTGATA CGATTCCATT GTCTGACGCA
GCCAAAGCTT GTAGCAAAAT TCGTCAAGTC AGCATTGCGC CAATGCTTGC TGAAAGCTTA
CGCCGTATTA ATAACGAAGA ATCTATCAGC GCGATGTTTG ACGCTTAA
|
|---|
| Protein sequence | MPYLAIFTGN AHPELAKTVA DHLHIPLGKA DITRFSDGEI AVEIKEHVRG KDVFIMQPTC
APTNDNLMEI MMMADALRRS SAGRITAVMP YFGYARQDRR PRSARVPISA KVVADMLNIV
SIDRVMTVDL HSDQIQGFFD IPVDNIYGTP VLLNDLQKQN YDNIMVVSPD VGGVVRARAM
AKQLGDTDMA IIDKRRARAN ESQVMHIIGD VRDRDCVIVD DMVDTAGTLC KAAEALKANG
ARRVVAYITH PVLSGNALKN ISESELDEIV VTDTIPLSDA AKACSKIRQV SIAPMLAESL
RRINNEESIS AMFDA
|
|---|
| |