Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0168 |
Symbol | |
ID | 3515130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 195455 |
End bp | 196129 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637668853 |
Product | hypothetical protein |
Protein accession | YP_263475 |
Protein GI | 71064748 |
COG category | [S] Function unknown |
COG ID | [COG1714] Predicted membrane protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.225097 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000787082 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAAAGA GTTTATCTAA ACGCCCGTCT AAATCTGCTG CTAAAGCACA GTCATCAAAC TCAGTATCCA AAATGTCAGC GCATCAAAAC TCTGAGATCG AAGAGCCAAC GATTGCTAAA CCAATGGCTC GTGTCGTAGC AATTCTCTAT GATGGCATGT TGATTTTAGC ATTGTTGTTC TTGGTAGGAA CTGTGCTAAC GGTGATTGGG ACGCTACTTA CGATGGAAAC GGGTTCGCAA TCTTCACAAG CCCAGTCGTT GCCAACATGG TATCAGAACT TTATCATGAC ACCATCATTT ATACTGACGC TAGTAGGGTT CTACGGGCTG TTTTGGCGTC GTGGTGGGCA AACCCTAGGG ATGCAGACTT GGCGCCTTAA AACCGTCAAT AACAACGGTT ATTTGCTCAC ATGGGGACAA TCCTTTAAAC GTATTTTTGC AGCGTCTTTG ATGCCATTAC TATTTGGCAT TATTGGCAGC TTAATCGGCG GCTCACGCGC TATATTACTA ACCAGCGCAT TTTTGGGACT GATATTTAAC TATGCATTCT GCTTATTTAA TCGTCGCGGC TTAGCAGTGC AAGATATGAT ATCGAATACC ATTACTTTGA AAATGCCAAA AGTCGAACAT GAAGGCTTGT GGCGTGGCTT TAGAAATCGT AAAAAGAGTC GCTAA
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Protein sequence | MSKSLSKRPS KSAAKAQSSN SVSKMSAHQN SEIEEPTIAK PMARVVAILY DGMLILALLF LVGTVLTVIG TLLTMETGSQ SSQAQSLPTW YQNFIMTPSF ILTLVGFYGL FWRRGGQTLG MQTWRLKTVN NNGYLLTWGQ SFKRIFAASL MPLLFGIIGS LIGGSRAILL TSAFLGLIFN YAFCLFNRRG LAVQDMISNT ITLKMPKVEH EGLWRGFRNR KKSR
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