Gene Psyc_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0168 
Symbol 
ID3515130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp195455 
End bp196129 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content43% 
IMG OID637668853 
Producthypothetical protein 
Protein accessionYP_263475 
Protein GI71064748 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.225097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000787082 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAAAGA GTTTATCTAA ACGCCCGTCT AAATCTGCTG CTAAAGCACA GTCATCAAAC 
TCAGTATCCA AAATGTCAGC GCATCAAAAC TCTGAGATCG AAGAGCCAAC GATTGCTAAA
CCAATGGCTC GTGTCGTAGC AATTCTCTAT GATGGCATGT TGATTTTAGC ATTGTTGTTC
TTGGTAGGAA CTGTGCTAAC GGTGATTGGG ACGCTACTTA CGATGGAAAC GGGTTCGCAA
TCTTCACAAG CCCAGTCGTT GCCAACATGG TATCAGAACT TTATCATGAC ACCATCATTT
ATACTGACGC TAGTAGGGTT CTACGGGCTG TTTTGGCGTC GTGGTGGGCA AACCCTAGGG
ATGCAGACTT GGCGCCTTAA AACCGTCAAT AACAACGGTT ATTTGCTCAC ATGGGGACAA
TCCTTTAAAC GTATTTTTGC AGCGTCTTTG ATGCCATTAC TATTTGGCAT TATTGGCAGC
TTAATCGGCG GCTCACGCGC TATATTACTA ACCAGCGCAT TTTTGGGACT GATATTTAAC
TATGCATTCT GCTTATTTAA TCGTCGCGGC TTAGCAGTGC AAGATATGAT ATCGAATACC
ATTACTTTGA AAATGCCAAA AGTCGAACAT GAAGGCTTGT GGCGTGGCTT TAGAAATCGT
AAAAAGAGTC GCTAA
 
Protein sequence
MSKSLSKRPS KSAAKAQSSN SVSKMSAHQN SEIEEPTIAK PMARVVAILY DGMLILALLF 
LVGTVLTVIG TLLTMETGSQ SSQAQSLPTW YQNFIMTPSF ILTLVGFYGL FWRRGGQTLG
MQTWRLKTVN NNGYLLTWGQ SFKRIFAASL MPLLFGIIGS LIGGSRAILL TSAFLGLIFN
YAFCLFNRRG LAVQDMISNT ITLKMPKVEH EGLWRGFRNR KKSR