| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0167 |
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| Symbol | thiD |
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| ID | 3515127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | - |
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| Start bp | 193860 |
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| End bp | 194654 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637668850 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_263474 |
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| Protein GI | 71064747 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00133155 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000172032 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGACCAG TCGTATTGTG CTTTTCAGGC TTAGATCCCT CCGGTGGGGC AGGATTGCAA
GCGGATATTG AAGCCATCGG GCAAGCAGGC GCTCATGCTG CTATCGCCTG TACCGCGATT
ACCGTACAAA GCTCACAGCA GGTCATTGGC TTTGAAGCAT GTGCAGCAGA TTTAGTAAGA
GATCAAGCGG TAGCAGTGCT CGATGATTTG CCTGTTAACG TTATCAAGTC AGGCATGCTC
GGCACTACCG ACAATATTGC TATGCTAACC CAGTTATTTG CTGATGAGAC TATCCCTGAG
GGGACACTTT TTGTTTTAGA TCCGGTATTG GTTGCCAATA GCGGTGACAG TTTGGGTGAT
GAGCAGACGC TGGTCACCGC ATTTAGACGG TTGCTACCCT ATGCCACCTT AATTACCCCT
AATACCCATG AGCTACGCGC CTTGAGTGCT GAACAAGACT TACATATAGG GGCGCAAAAA
TTATGCGCAC AAGGAACCTA TGCCGTGTTG GTCAAAACTT CACATGATTT TGATAGCGGT
GATATTGAGC AGTATTTATA CATAGAAGGT GAAATGGTAT ATAAAAGTAC CTTGCCGCGC
CTAGATGGTG AGTTTCATGG CTCTGGCTGC TCGCTAGCCA GTTTTATCGC GGGACGCTTG
GCAATGGGTG ATGCGCTTAT CGATGCGGTT AAGGCAGCGG ATAGCTGGAT TACCAAAACC
TTGCGTGCTG CTGACGTGCC TCACCCTGAG GATTCTAAAG CGCAATTGAT ACCCAATCGC
TTTGTCCGCT TTTAA
|
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| Protein sequence | MRPVVLCFSG LDPSGGAGLQ ADIEAIGQAG AHAAIACTAI TVQSSQQVIG FEACAADLVR
DQAVAVLDDL PVNVIKSGML GTTDNIAMLT QLFADETIPE GTLFVLDPVL VANSGDSLGD
EQTLVTAFRR LLPYATLITP NTHELRALSA EQDLHIGAQK LCAQGTYAVL VKTSHDFDSG
DIEQYLYIEG EMVYKSTLPR LDGEFHGSGC SLASFIAGRL AMGDALIDAV KAADSWITKT
LRAADVPHPE DSKAQLIPNR FVRF
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