| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0144 |
|---|
| Symbol | |
|---|
| ID | 3514510 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 170201 |
|---|
| End bp | 171484 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637668828 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_263452 |
|---|
| Protein GI | 71064725 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
|---|
| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00352023 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC CAACACCTGA AACGCCTCCT GAACGTCCTA ATGATACGCT ATCGAATGAC
CAAAAAGGCA CTGCTGACGA GCGTGTCGAT GGGACACCTT TGAATTCAAA ACCAGTCGAT
GAGACAGGTG CAAAAGAAGT TCCGCCTACC GATATCTCGC TCATTAGCGG TGATAATAAA
CCACGCCATT ATAAAATCGA TAACCCTTCA TTCTTTATGC AGCGTGGTTA TCAAGTACTA
TTGGTGCTTG GGTTAATTGC TGCATTTTTC TTGGTCATGG TTTATCAGAC TTTATTTGGT
CGGATTGAAC AGCCGCAGCA GATGGTGACG ATTGAGAAAG GTCAGACCTA TTACGGTTTG
CTACCGCAGT GGCAACAGGA AATCCCGCTG TTTTCTGCCA CGATTGCCAA GCTTTATATG
AAAACGCAGG TCGATGGTCC ATTGCATGCC GGTATTTACC AATTACCGGA AAACCCTACC
ATTGCTGAGG CGCTACACGT ACTTGGGCAA GGGGTAAAAG CGGCAATGGT CAAGGTACAA
ATTATCGAGG GCAAAACCTC AAAAGATTTG TATCAGGCGC TACGTGATAA TAAAGGCATC
AAAAAAGAAG TGCTAACGGC TGACAGTACG AATGCTAGCA TCGCACAAGC GTTAGATTTG
GTTGGTATCT TGCCGGATAC GGTTGCCAAC AGTAATGACC CTATCGTTAA TCACAATCTT
GAAGGCTGGT TTGCCCCTGA TACTTATTAT TATGGAGAAG GCACCACTGA CAAGAAAGTG
TTGACCGACT TGTACAAGCG CCAACAGCAG GCACTGACCA AGGCATGGGA AAACCGTGCG
CCAAACCTCC CTTATCAGAG CCCTTATGAG GCGCTGGTGA TGGCGTCTAT TATTGAAAAA
GAAACCAGTG TGGAAGAAGA GCGTCCTTTG GTCTCAGCAG TCTTTAATAA CCGCTTGAAC
AAAAGCATGC GTATGCAGAC GGATCCTACC ATTATCTATG GTATGGGCAG CCGCTATGAA
GGTAATATTC GCCGTAAAGA CATCGATGAA AAAACGCGCT ATAACACCTA TCAAATCGAT
GGTTTGCCGC CTACACCCAT TGCACTGCCG TCAGCTGCTT CTATCGAAGC AACCTTACAT
CCTGCTAAGA GCGAAGCGCT ATATTTTGTG GCGACAGGCA ACGGCGGGCA TAAATTTACC
AATAGCTTAA CTGAGCACAA TCAAGCGGTT AAAGAGTATC TCGGCGTCAT GCGTGAGAAA
AAAGCCCAAA CGCCGCCGCA GTAA
|
|---|
| Protein sequence | MSTPTPETPP ERPNDTLSND QKGTADERVD GTPLNSKPVD ETGAKEVPPT DISLISGDNK
PRHYKIDNPS FFMQRGYQVL LVLGLIAAFF LVMVYQTLFG RIEQPQQMVT IEKGQTYYGL
LPQWQQEIPL FSATIAKLYM KTQVDGPLHA GIYQLPENPT IAEALHVLGQ GVKAAMVKVQ
IIEGKTSKDL YQALRDNKGI KKEVLTADST NASIAQALDL VGILPDTVAN SNDPIVNHNL
EGWFAPDTYY YGEGTTDKKV LTDLYKRQQQ ALTKAWENRA PNLPYQSPYE ALVMASIIEK
ETSVEEERPL VSAVFNNRLN KSMRMQTDPT IIYGMGSRYE GNIRRKDIDE KTRYNTYQID
GLPPTPIALP SAASIEATLH PAKSEALYFV ATGNGGHKFT NSLTEHNQAV KEYLGVMREK
KAQTPPQ
|
|---|
| |