Gene Psyc_0134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0134 
Symbol 
ID3514738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp158102 
End bp160894 
Gene Length2793 bp 
Protein Length930 aa 
Translation table11 
GC content44% 
IMG OID637668818 
Productglycerol-3-phosphate acyltransferase 
Protein accessionYP_263442 
Protein GI71064715 
COG category[I] Lipid transport and metabolism 
COG ID[COG2937] Glycerol-3-phosphate O-acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0908404 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.57314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACCGA AGTTCTTAAA AAAACGGATT TTTAAAGTAC CAGTGGTTAG CGGTAATACG 
CCAGCCACTG AACCGTCAGT CACGCCAAAA ATTGATGGTA GCCCAGTTGT AATCACGCCT
TATTCTAATG CACCAATCAA TCAGCTATAT CGCAAGCTGT CAGGGCAGAT CCTTGATGTG
GCGGTAAAAC CAAAGCTTTT GGGCGAGTTG CCTGAGTTTG ATCATGATGA TCAAACTTTA
AGGTTCTATG TGTTGCAAGA TTATTCGCGC TCCAACAGTA TTTTGATTGA CCTGCAAACG
CAAGAGCACA AACTACCGCC AGCATTGGTT GGGGTAAATG ACAGTGCTCA TAATATAAAA
GAAAATGCTG CCATTATATT TTTGCATCAC CCACATGCTA AAGATACCCA GTTATCACCG
CGCTTATCAC GTCTGGTCTC TGCTGTTTTG CAGTATCCAC AATTAAAAGT ATGCTTGGTA
CCGGTATCTA TCCTCTGGGG ACGCGCGCCA GAAAAAGAGG ATTCTTTATT TAAACTGCTA
ACGGCGGATA ACTGGCAAGA TCCTAGCATC ACCAAGCAGT TATTTAATAT TGGTGTAATG
GGACGCGATA CTTTTATTCA GTTCCATCCG CCGCAAGATT TGCGTACTCT TATTGATGAT
GGCCTCAAGG GCAATGATGA GGAATCAGCT GTCTTTGATT CTGCTCTTTT TGAATCTATT
ACCAGTGATT CAAATGGCAG TCATGATATC GACAGCACTA CTAAAAATAC AATCGATGCA
GCACCAAATT ATACTGTAGT AGCAGCGGCT GATGGCAATC GTGAGCTTGT ACGCTCCCTT
CAAGAACAGC TCAATATTTA TTTGGACAAA CAACGCGCCA GTATGCTCGG CCCTGATTTA
TCAGACAGAC GTAACTTAGT AGACAAGCTG GTTTACTCGC CTGCCATTAA GCATGCAATA
GAAGCGCAAG CGGCAGAGAC AGGTACTAGC CCTCGTGAAG CACGACTGCT CGCAAAGAGC
TACGCTAATG AGATGGTCAA CGACTACTCA CATTCCATCA TTCGCGGTTT TTACAAATTT
TTAACGTGGT TATGGACGCA ACTGTATGAT GGTGTAGAAG TCCACCACTT CGAGCGCGTA
CGTGAGCTTG CAGCAGATTA TGAGCTAGTG TATGTACCTT GTCATCGTAG CCATGTTGAC
TACCTACTAC TGTCTTATGT CATCTATAAA CGTGGTTTGA GCATTCCTTA TGTCGCCGCT
GGAGATAATT TAGATGTGCC AGTTTTAGGC CCAATATTAC GCGGCGCAGT GGCTTTTTAT
ATTCGTCGTA GTTTCCGTGG TAATGCGCTT TATACCGCTG TCTTACGTGA ATACATGCAC
ACGCTTATTA CCCGTAATAC CCCAATTGAA TACTTTATCG AAGGTGGTCG CTCACGCTCA
GGACGCTTGC TACCACCAAA AATGGGTATG CTGGCAATGA CAGTACACAG CCAATTGCGC
CAAAGCAACA AGCCGGTGGT CTTTATTCCG ACCTATATTG GTTATGAGCG TATTATGGAA
GGTGGCACCT ATGTCGGTGA GCTAAAAGGG AAACCAAAAG AGTCTGAGTC TTTAATTGGA
CTGCTCAAAG TCGGTCGCAA GATTGAGCGT ATTTTTGGCA ATGTCCACCT AAGCTTTGGT
ACACCGCTAC ATTTGACCGA TTTTATGACC AAATTTGATG TACCGGAAAA TAGCTTACCT
GTTGATCGTA CGGATACTCC TCTCGATAGT AAAGCCAGCA CGATGGTGGA TAATATCGGC
ATAAAAGTCA TGCAGCATAT CAATAAAGCA GCGGTAGTCA CTCCAGTATC ACTGCTGTCA
TTGGTATTAT TATCTGCACC AAAATCGGCG CTCGATGAAG ATATTTGCCG TGAGCAAATT
GCTCTATATC AAGGTTTGGC TCAACAGCTG CCGTATTCAA GTGATACGGT CGTCACCGAC
ATGTCACCGC AGCACATCAT TGATTACGGC ATCAAACTGA AGCTTATTGA GCGTATCCCT
CATATTTTAG GCGATATCAT TCAAATTGCA GGTAAGCAAG CGGCATTACT GAGCTATTTC
CGCAATAACA TTCTTCATGT CTTTATTCTA CTGTCTTTCT TGGCGGCTTT AGTTGCCCGT
AATGGTCGTA TAGAACGTAG TCGTCTGGAC AATATCGCCA ATCAGCTCTA TCCATTTTTG
CAAAGTGAGC TGTTTTTATA CTATCCTGCG CATAGTCTGG CTGATACCCT TAACAAAAAA
GTTGACAGTC TGATTGCTCA CGGTCTGATT GTAGAATTGG GTGATGGCAT GCTGAGTGTC
CCTGAAGCCA ATAGTAGATG CTACCAGCAG CTACAAGTGC TCGCGACTCC GGTTGAACAA
AGTCTTGAAC GCTACTTTAT GACCTTGGCC CTACTTGCCC AGCAAGGCTC AGGCAATTTA
ACTGAAAACG AAGTGGTTGA TCTATGCCAT CTACTCGGTC AGCGTTTATC GGTACTCTAT
GCCGATGATA TTCCCGACTT CTTTGACCGC GCGCTATTCA CCAGTTTCCT CGGTGCGCTG
ACTCGTCTCG ATTATCTGCA AAAAGCAGCA GAAACCGGTA TCTTAACCTT TGATCACCGT
ATCAATGACA TTGCTCATCA TGCAAAATAC GTGCTGAAAC CTGAAATAAT GCAAATCTTG
CATCAAGTTG CCAGTCTCAA TGAAGCAGAG ATTGCTCATG CTATTACTGA GATCAGCAAT
AAAAAGCAGC GTAAATTTGG GCGTAAACGT TAA
 
Protein sequence
MIPKFLKKRI FKVPVVSGNT PATEPSVTPK IDGSPVVITP YSNAPINQLY RKLSGQILDV 
AVKPKLLGEL PEFDHDDQTL RFYVLQDYSR SNSILIDLQT QEHKLPPALV GVNDSAHNIK
ENAAIIFLHH PHAKDTQLSP RLSRLVSAVL QYPQLKVCLV PVSILWGRAP EKEDSLFKLL
TADNWQDPSI TKQLFNIGVM GRDTFIQFHP PQDLRTLIDD GLKGNDEESA VFDSALFESI
TSDSNGSHDI DSTTKNTIDA APNYTVVAAA DGNRELVRSL QEQLNIYLDK QRASMLGPDL
SDRRNLVDKL VYSPAIKHAI EAQAAETGTS PREARLLAKS YANEMVNDYS HSIIRGFYKF
LTWLWTQLYD GVEVHHFERV RELAADYELV YVPCHRSHVD YLLLSYVIYK RGLSIPYVAA
GDNLDVPVLG PILRGAVAFY IRRSFRGNAL YTAVLREYMH TLITRNTPIE YFIEGGRSRS
GRLLPPKMGM LAMTVHSQLR QSNKPVVFIP TYIGYERIME GGTYVGELKG KPKESESLIG
LLKVGRKIER IFGNVHLSFG TPLHLTDFMT KFDVPENSLP VDRTDTPLDS KASTMVDNIG
IKVMQHINKA AVVTPVSLLS LVLLSAPKSA LDEDICREQI ALYQGLAQQL PYSSDTVVTD
MSPQHIIDYG IKLKLIERIP HILGDIIQIA GKQAALLSYF RNNILHVFIL LSFLAALVAR
NGRIERSRLD NIANQLYPFL QSELFLYYPA HSLADTLNKK VDSLIAHGLI VELGDGMLSV
PEANSRCYQQ LQVLATPVEQ SLERYFMTLA LLAQQGSGNL TENEVVDLCH LLGQRLSVLY
ADDIPDFFDR ALFTSFLGAL TRLDYLQKAA ETGILTFDHR INDIAHHAKY VLKPEIMQIL
HQVASLNEAE IAHAITEISN KKQRKFGRKR