| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0133 |
|---|
| Symbol | |
|---|
| ID | 3514737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 156306 |
|---|
| End bp | 157967 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637668817 |
|---|
| Product | putative ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_263441 |
|---|
| Protein GI | 71064714 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0668164 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAAT ATATCTACAC GATGAACAGC GTGTCAAAAC TTGTTCCACC TAAGCGTGAA
ATCTTAAAAA ATATTAATCT GTCATTTTTC CCTGGTGCCA AAATTGGTGT TTTGGGTATC
AATGGTTCAG GTAAATCAAC CTTGCTACGC ATCATGGCGG GTGTGGATAC TGAATTTAGT
GGTGAAGCTC GTGCACAAAC GGGCACCAAA ATTGGTTATC TGCCGCAGGA ACCACAGCTT
GACGACAGTA AAGACGTACG TGGTAATGTC GAAGACGGCA TGCGTGAAGC GCTAGATGCG
CTTGCACGTT TAGATGCTAT TTATGCTGAA TATGCTGAGC CTGATGCTGA CTTTGATAAG
CTTGCTGAAG AGCAAGGTAA GATGGAAGAC ATCATCCAAG CATGGGATGC GCATAACTTA
AATACCCAGC TTGAAAGAGC CGCCGATGCA TTGCGTCTGC CACCATGGGA TGCTGATGTC
AGCAAACTAT CAGGTGGTGA GAAACGCCGT GTGGCATTAT GCCGCTTGCT ATTGTCGCGC
CCTGATATGC TATTACTTGA CGAACCAACC AACCATTTGG ACGCTGAGTC CGTGGCATGG
TTAGAGCAGT TCCTACAGAA TTATAGCGGT ACTATCGTTG CCATTACCCA TGACCGTTAT
TTCTTGGATA ACGTTGCTCA GTGGATTTTG GAGCTTGACC GTGGTCATGG CTATCCGTAT
GAAGGCAACT ATACTGAGTG GCTCGAGCAA AAGAACACAC GTCTAGAGCA GCAGAATAAG
CAAGAAGAGT CGTTTGCTAA AGCGCTGAAA AAAGAGCTTG ATTGGATTCG CAAAAATCAA
AAAGGTCAGC AGGCTAAGTC TAAGTCTCGT GTACAGCGTT TTGAAGAATT GAACTCGCAA
GAATTCCAAA AACGTAATGA GACCTCTGAG ATTTATATTC CACCGGGTCC TCGTTTGGGT
AATAAAGTCA TCGAAGTGAA TGATATCTCC AAATCATTTG GCGACCGTTT GCTTTATGAA
AACCTTAGCT TTAATGTCCC AGCCGGTGCC ATTGTTGGTA TCATCGGACC AAATGGTGCG
GGTAAAACCA CGCTATTTAA CATGATTACC GAACGCGATA CGCCAGATAC TGGTTCAGTT
GATTTGGGTG AAAGTGTTAA AGTTGCTTAT GTTGGTCAGG TACGCGACAA CTTAGATGAC
AATAAAACCG TTTGGGAAGA AATCTCTGAC GGGCTTGATA TCATTACCGT TGGCGACTAT
ACCACTCCAA GCCGCGCTTA CATTGGTCGC TTTAACTTTA AAGGTTCAGA CCAGCAGAAG
CATGTAGGTC AATTGTCAGG TGGTGAGCGT AACCGCTTAC AGTTAGCTAA GACATTGAAG
CAAGGCGCGA ACGTCTTGCT TCTTGATGAA CCATCAAACG ATTTAGATAT CGAAACCTTA
CGTGCGCTAG AAGATGCAAT TCAAGTCTTC CCAGGTACCG TTATGGTGGT GTCGCATGAT
CGCTGGTTCC TTGACCGTAT CGCGACTCAT ATCTTGGCAT TTGAAGATGA AGGTCCAGTT
TGGTTCGATG GTAACTATTC TGAGTTTGAA ACTTATCGCA AAAAGACGAT GGGTGATGAT
GCCAATCCTA AGCGCATGAA GTATAAGAAA ATTTCAACCT AG
|
|---|
| Protein sequence | MAQYIYTMNS VSKLVPPKRE ILKNINLSFF PGAKIGVLGI NGSGKSTLLR IMAGVDTEFS
GEARAQTGTK IGYLPQEPQL DDSKDVRGNV EDGMREALDA LARLDAIYAE YAEPDADFDK
LAEEQGKMED IIQAWDAHNL NTQLERAADA LRLPPWDADV SKLSGGEKRR VALCRLLLSR
PDMLLLDEPT NHLDAESVAW LEQFLQNYSG TIVAITHDRY FLDNVAQWIL ELDRGHGYPY
EGNYTEWLEQ KNTRLEQQNK QEESFAKALK KELDWIRKNQ KGQQAKSKSR VQRFEELNSQ
EFQKRNETSE IYIPPGPRLG NKVIEVNDIS KSFGDRLLYE NLSFNVPAGA IVGIIGPNGA
GKTTLFNMIT ERDTPDTGSV DLGESVKVAY VGQVRDNLDD NKTVWEEISD GLDIITVGDY
TTPSRAYIGR FNFKGSDQQK HVGQLSGGER NRLQLAKTLK QGANVLLLDE PSNDLDIETL
RALEDAIQVF PGTVMVVSHD RWFLDRIATH ILAFEDEGPV WFDGNYSEFE TYRKKTMGDD
ANPKRMKYKK IST
|
|---|
| |