Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0133 |
Symbol | |
ID | 3514737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 156306 |
End bp | 157967 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637668817 |
Product | putative ABC transporter ATP-binding protein |
Protein accession | YP_263441 |
Protein GI | 71064714 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0668164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCAAT ATATCTACAC GATGAACAGC GTGTCAAAAC TTGTTCCACC TAAGCGTGAA ATCTTAAAAA ATATTAATCT GTCATTTTTC CCTGGTGCCA AAATTGGTGT TTTGGGTATC AATGGTTCAG GTAAATCAAC CTTGCTACGC ATCATGGCGG GTGTGGATAC TGAATTTAGT GGTGAAGCTC GTGCACAAAC GGGCACCAAA ATTGGTTATC TGCCGCAGGA ACCACAGCTT GACGACAGTA AAGACGTACG TGGTAATGTC GAAGACGGCA TGCGTGAAGC GCTAGATGCG CTTGCACGTT TAGATGCTAT TTATGCTGAA TATGCTGAGC CTGATGCTGA CTTTGATAAG CTTGCTGAAG AGCAAGGTAA GATGGAAGAC ATCATCCAAG CATGGGATGC GCATAACTTA AATACCCAGC TTGAAAGAGC CGCCGATGCA TTGCGTCTGC CACCATGGGA TGCTGATGTC AGCAAACTAT CAGGTGGTGA GAAACGCCGT GTGGCATTAT GCCGCTTGCT ATTGTCGCGC CCTGATATGC TATTACTTGA CGAACCAACC AACCATTTGG ACGCTGAGTC CGTGGCATGG TTAGAGCAGT TCCTACAGAA TTATAGCGGT ACTATCGTTG CCATTACCCA TGACCGTTAT TTCTTGGATA ACGTTGCTCA GTGGATTTTG GAGCTTGACC GTGGTCATGG CTATCCGTAT GAAGGCAACT ATACTGAGTG GCTCGAGCAA AAGAACACAC GTCTAGAGCA GCAGAATAAG CAAGAAGAGT CGTTTGCTAA AGCGCTGAAA AAAGAGCTTG ATTGGATTCG CAAAAATCAA AAAGGTCAGC AGGCTAAGTC TAAGTCTCGT GTACAGCGTT TTGAAGAATT GAACTCGCAA GAATTCCAAA AACGTAATGA GACCTCTGAG ATTTATATTC CACCGGGTCC TCGTTTGGGT AATAAAGTCA TCGAAGTGAA TGATATCTCC AAATCATTTG GCGACCGTTT GCTTTATGAA AACCTTAGCT TTAATGTCCC AGCCGGTGCC ATTGTTGGTA TCATCGGACC AAATGGTGCG GGTAAAACCA CGCTATTTAA CATGATTACC GAACGCGATA CGCCAGATAC TGGTTCAGTT GATTTGGGTG AAAGTGTTAA AGTTGCTTAT GTTGGTCAGG TACGCGACAA CTTAGATGAC AATAAAACCG TTTGGGAAGA AATCTCTGAC GGGCTTGATA TCATTACCGT TGGCGACTAT ACCACTCCAA GCCGCGCTTA CATTGGTCGC TTTAACTTTA AAGGTTCAGA CCAGCAGAAG CATGTAGGTC AATTGTCAGG TGGTGAGCGT AACCGCTTAC AGTTAGCTAA GACATTGAAG CAAGGCGCGA ACGTCTTGCT TCTTGATGAA CCATCAAACG ATTTAGATAT CGAAACCTTA CGTGCGCTAG AAGATGCAAT TCAAGTCTTC CCAGGTACCG TTATGGTGGT GTCGCATGAT CGCTGGTTCC TTGACCGTAT CGCGACTCAT ATCTTGGCAT TTGAAGATGA AGGTCCAGTT TGGTTCGATG GTAACTATTC TGAGTTTGAA ACTTATCGCA AAAAGACGAT GGGTGATGAT GCCAATCCTA AGCGCATGAA GTATAAGAAA ATTTCAACCT AG
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Protein sequence | MAQYIYTMNS VSKLVPPKRE ILKNINLSFF PGAKIGVLGI NGSGKSTLLR IMAGVDTEFS GEARAQTGTK IGYLPQEPQL DDSKDVRGNV EDGMREALDA LARLDAIYAE YAEPDADFDK LAEEQGKMED IIQAWDAHNL NTQLERAADA LRLPPWDADV SKLSGGEKRR VALCRLLLSR PDMLLLDEPT NHLDAESVAW LEQFLQNYSG TIVAITHDRY FLDNVAQWIL ELDRGHGYPY EGNYTEWLEQ KNTRLEQQNK QEESFAKALK KELDWIRKNQ KGQQAKSKSR VQRFEELNSQ EFQKRNETSE IYIPPGPRLG NKVIEVNDIS KSFGDRLLYE NLSFNVPAGA IVGIIGPNGA GKTTLFNMIT ERDTPDTGSV DLGESVKVAY VGQVRDNLDD NKTVWEEISD GLDIITVGDY TTPSRAYIGR FNFKGSDQQK HVGQLSGGER NRLQLAKTLK QGANVLLLDE PSNDLDIETL RALEDAIQVF PGTVMVVSHD RWFLDRIATH ILAFEDEGPV WFDGNYSEFE TYRKKTMGDD ANPKRMKYKK IST
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