Gene Psyc_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0117 
SymbolpanC 
ID3514487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp139644 
End bp140510 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content46% 
IMG OID637668801 
Productpantoate--beta-alanine ligase 
Protein accessionYP_263425 
Protein GI71064698 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0414] Panthothenate synthetase 
TIGRFAM ID[TIGR00018] pantoate--beta-alanine ligase
[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATGA TTCATCACCA TATCTCAGAC CTACGCGCCG CCCTACAACC TTATCGCGCC 
GCGCCGCGCA TTGCATTAGT ACCAACAATG GGCAATTTAC ATGAGGGTCA TCTGGAGCTG
GTAAACATTG CCAAACAGCA TGCCGATATC GTCGTGGTCA GTATTTTTGT CAATCCAACG
CAGTTTGGGG TTGGTGAAGA CTTTGATAGC TATCCTCGCA CCTTGGATGA AGATGTTGCA
AAGCTAGCCA CGGTTGGCGC TGATTATGTT TTTGCACCAA GTATTGATGA GATGTATCCG
GTATTACCGC CGCCGACCAC TATTCTTGCT GGGACTATTA CTGAGCAACT ATGTGGCAAA
ACCCGCCCCA CTCATTTTGA TGGTGTCGGC ATAGTCGTCT CTAAGTTATT TAATATTGTG
CAGCCTAACG TAGCTGTATT TGGGCAAAAA GATTACCAGC AATTGGCCAT TATCAAGCAA
TTGGTTCGTG ATTTGAGCTA TTCAATCGAG ATTATTGGCG CGCCTATTGT CCGTGCTGCT
GATGGCTTAG CTTTATCATC ACGTAATCAG TATTTAAGCG AGTCTGAGCG CCAAATAGCG
CCTATCTTAC AGCAAGAGTT ACAGTATTTA GCCAAACAGA TTACGGATAA GCAGCAGCCA
TTAGATGTGC TTTTGACGGC AGCTCGGGAG CGTATTACGA GCGCTGGTTT TATTATTGAC
TATTTAGAAA TAAAAACCGC TGAGCTAACG GCTGTGGATG ATGACAGCGT CAATGAGCAT
CAAGAGTTGG TTGTTTTAGT GGCTGCAGGG TTAGGTCGTG CGCGCTTGCT CGACAATCAA
TTGGTAACGA TTAATAAGTC GTTGTGA
 
Protein sequence
MPMIHHHISD LRAALQPYRA APRIALVPTM GNLHEGHLEL VNIAKQHADI VVVSIFVNPT 
QFGVGEDFDS YPRTLDEDVA KLATVGADYV FAPSIDEMYP VLPPPTTILA GTITEQLCGK
TRPTHFDGVG IVVSKLFNIV QPNVAVFGQK DYQQLAIIKQ LVRDLSYSIE IIGAPIVRAA
DGLALSSRNQ YLSESERQIA PILQQELQYL AKQITDKQQP LDVLLTAARE RITSAGFIID
YLEIKTAELT AVDDDSVNEH QELVVLVAAG LGRARLLDNQ LVTINKSL